RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 THUMPD3Q9BV44 507 aaKnown RBP3.84□□□□□ -1.79
PRKDC-205ENST00000535375 SLC39A8Q9C0K1 460 aa3.84□□□□□ -1.79
PRKDC-205ENST00000535375 CUEDC2Q9H467 287 aa3.84□□□□□ -1.79
PRKDC-205ENST00000535375 GRPEL1Q9HAV7 217 aa3.84□□□□□ -1.79
PRKDC-205ENST00000535375 DNAJB9Q9UBS3 223 aa3.84□□□□□ -1.79
PRKDC-205ENST00000535375 CELA1Q9UNI1 258 aa3.84□□□□□ -1.79
PRKDC-205ENST00000535375 GPR132Q9UNW8 380 aa3.84□□□□□ -1.79
PRKDC-205ENST00000535375 FBXO7Q9Y3I1 522 aa3.84□□□□□ -1.79
PRKDC-205ENST00000535375 POGZQ7Z3K3 1410 aa3.84□□□□□ -1.79
PRKDC-205ENST00000535375 SLC30A4O14863 429 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 HAT1O14929 419 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 VENTXO95231 258 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 TGDSO95455 350 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 HSP90AB1P08238 724 aaKnown RBP3.83□□□□□ -1.8
PRKDC-205ENST00000535375 GSTA2P09210 222 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 DUX4L4P0CJ87 422 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 CASTP20810 708 aaKnown RBP3.83□□□□□ -1.8
PRKDC-205ENST00000535375 ATP5DP30049 168 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 ID1P41134 155 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 ALDH3B1P43353 468 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 FHITP49789 147 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 KRTAP12-2P59991 146 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 PTK6Q13882 451 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 CRMP1Q14194 572 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 SLC22A6Q4U2R8 563 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 CACUL1Q86Y37 369 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 SAMD12Q8N8I0 201 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 NHLRC2Q8NBF2 726 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 CORO2AQ92828 525 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 CDHR1Q96JP9 859 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 ZNF665Q9H7R5 613 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 EXOC6BQ9Y2D4 811 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 HCFC1P51610 2035 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 ZNF318Q5VUA4 2279 aa3.83□□□□□ -1.8
PRKDC-205ENST00000535375 CCSO14618 274 aa3.82□□□□□ -1.8
PRKDC-205ENST00000535375 FRAT2O75474 233 aaPredicted RBP3.82□□□□□ -1.8
PRKDC-205ENST00000535375 OR9G9P0C7N8 305 aa3.82□□□□□ -1.8
PRKDC-205ENST00000535375 TCF7P36402 384 aaPredicted RBP3.82□□□□□ -1.8
PRKDC-205ENST00000535375 TYSND1Q2T9J0 566 aa3.82□□□□□ -1.8
PRKDC-205ENST00000535375 TIMM50Q3ZCQ8 353 aa3.82□□□□□ -1.8
PRKDC-205ENST00000535375 LINC00242Q5T6M2 205 aa3.82□□□□□ -1.8
PRKDC-205ENST00000535375 OR6T1Q8NGN1 323 aa3.82□□□□□ -1.8
PRKDC-205ENST00000535375 GDAP1Q8TB36 358 aa3.82□□□□□ -1.8
PRKDC-205ENST00000535375 TCP11Q8WWU5 503 aa3.82□□□□□ -1.8
PRKDC-205ENST00000535375 CCDC114Q96M63 670 aa3.82□□□□□ -1.8
PRKDC-205ENST00000535375 ERGIC2Q96RQ1 377 aa3.82□□□□□ -1.8
PRKDC-205ENST00000535375 MLPHQ9BV36 600 aaPredicted RBP3.82□□□□□ -1.8
PRKDC-205ENST00000535375 SLITRK2Q9H156 845 aa3.82□□□□□ -1.8
PRKDC-205ENST00000535375 TMEM161AQ9NX61 479 aa3.82□□□□□ -1.8
PRKDC-205ENST00000535375 PLEK2Q9NYT0 353 aa3.82□□□□□ -1.8
PRKDC-205ENST00000535375 ARMCX3Q9UH62 379 aaPredicted RBP3.82□□□□□ -1.8
PRKDC-205ENST00000535375 LRRTM2O43300 516 aa3.81□□□□□ -1.8
PRKDC-205ENST00000535375 SRPX2O60687 465 aaPredicted RBP3.81□□□□□ -1.8
PRKDC-205ENST00000535375 KBTBD11O94819 623 aa3.81□□□□□ -1.8
PRKDC-205ENST00000535375 OR6A2O95222 327 aa3.81□□□□□ -1.8
PRKDC-205ENST00000535375 SLU7O95391 586 aaKnown RBP3.81□□□□□ -1.8
PRKDC-205ENST00000535375 PIGRP01833 764 aa3.81□□□□□ -1.8
PRKDC-205ENST00000535375 SUPT20HL2P0C7V6 817 aa3.81□□□□□ -1.8
PRKDC-205ENST00000535375 UMPSP11172 480 aa3.81□□□□□ -1.8
PRKDC-205ENST00000535375 EZRP15311 586 aaKnown RBP3.81□□□□□ -1.8
PRKDC-205ENST00000535375 KCNJ1P48048 391 aa3.81□□□□□ -1.8
PRKDC-205ENST00000535375 TRA2BP62995 288 aaKnown RBP3.81□□□□□ -1.8
PRKDC-205ENST00000535375 ACKR1Q16570 336 aa3.81□□□□□ -1.8
PRKDC-205ENST00000535375 PRR30Q53SZ7 412 aaPredicted RBP3.81□□□□□ -1.8
PRKDC-205ENST00000535375 SNRNP48Q6IEG0 339 aaKnown RBP3.81□□□□□ -1.8
PRKDC-205ENST00000535375 CCBE1Q6UXH8 406 aaPredicted RBP3.81□□□□□ -1.8
PRKDC-205ENST00000535375 SAP25Q8TEE9 199 aa3.81□□□□□ -1.8
PRKDC-205ENST00000535375 ZNF414Q96IQ9 312 aa3.81□□□□□ -1.8
PRKDC-205ENST00000535375 NT5DC2Q9H857 520 aa3.81□□□□□ -1.8
PRKDC-205ENST00000535375 SRD5A3Q9H8P0 318 aa3.81□□□□□ -1.8
PRKDC-205ENST00000535375 MRPL17Q9NRX2 175 aaKnown RBP3.81□□□□□ -1.8
PRKDC-205ENST00000535375 DHRS4-AS1Q9P1J3 65 aa3.81□□□□□ -1.8
PRKDC-205ENST00000535375 ARMCX1Q9P291 453 aa3.81□□□□□ -1.8
PRKDC-205ENST00000535375 SLC6A5Q9Y345 797 aa3.81□□□□□ -1.8
PRKDC-205ENST00000535375 UMODL1Q5DID0 1318 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 TRAV9-2A0A087WT02 112 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 A0A1W2PNU3 283 aaPredicted RBP3.8□□□□□ -1.8
PRKDC-205ENST00000535375 OOEPA6NGQ2 149 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 FOXI3A8MTJ6 420 aaPredicted RBP3.8□□□□□ -1.8
PRKDC-205ENST00000535375 ZNF724A8MTY0 619 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 CRCPO75575 148 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 FHP07954 510 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 GJB2P29033 226 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 OAS2P29728 719 aaKnown RBP3.8□□□□□ -1.8
PRKDC-205ENST00000535375 LYZP61626 148 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 NAAAQ02083 359 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 ABRAXAS2Q15018 415 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 MEP1BQ16820 701 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 PCK2Q16822 640 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 CNPY1Q3B7I2 92 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 AGAP6Q5VW22 663 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 RFWD3Q6PCD5 774 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 PIWIL3Q7Z3Z3 882 aaKnown RBP3.8□□□□□ -1.8
PRKDC-205ENST00000535375 ZNRF1Q8ND25 227 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 FIBINQ8TAL6 211 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 MRAPQ8TCY5 172 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 RASL10BQ96S79 203 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 LRRC2Q9BYS8 371 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 ELL3Q9HB65 397 aaPredicted RBP3.8□□□□□ -1.8
PRKDC-205ENST00000535375 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms