RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 IRF8Q02556 426 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 ELAVL1Q15717 326 aaKnown RBP9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 HIST2H2ACQ16777 129 aaPredicted RBP9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 PAGE2BQ5JRK9 111 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 CES4AQ5XG92 561 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 HIST2H2AA3Q6FI13 130 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 C3P1Q6ZMU1 363 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 CCDC91Q7Z6B0 441 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 RELL1Q8IUW5 271 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 SULF2Q8IWU5 870 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 GHDCQ8N2G8 530 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 TMEM132CQ8N3T6 1108 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 ACOT4Q8N9L9 421 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 ZFP62Q8NB50 900 aaPredicted RBP9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 POGLUT1Q8NBL1 392 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 SRFBP1Q8NEF9 429 aaKnown RBP9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 OR7G3Q8NG95 312 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 AGAP11Q8TF27 550 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 UBE2E3Q969T4 207 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 ANKRD9Q96BM1 317 aaPredicted RBP9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 GPR78Q96P69 363 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 MAPKAP1Q9BPZ7 522 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 TBCDQ9BTW9 1192 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 FUT8Q9BYC5 575 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 ALOXE3Q9BYJ1 711 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 ROGDIQ9GZN7 287 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 TSPAN10Q9H1Z9 355 aaPredicted RBP9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 DLL4Q9NR61 685 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 PLSCR2Q9NRY7 297 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 COQ3Q9NZJ6 369 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 NPIPA1Q9UND3 350 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 MRPS33Q9Y291 106 aaKnown RBP9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 YARS2Q9Y2Z4 477 aaKnown RBP9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 HCFC1P51610 2035 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 A0A087X1B8 175 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 KIAA1324LA8MWY0 1029 aaPredicted RBP9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 KLRC4-KLRK1H3BQV0 150 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 RTCAO00442 366 aaKnown RBP9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 ADAM10O14672 748 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 ZFAND5O76080 213 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 ZWINTO95229 277 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 TGFB1P01137 390 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 C2P06681 752 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 ABOP16442 354 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 HIST1H1TP22492 207 aaPredicted RBP9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 SERPINB1P30740 379 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 MSH2P43246 934 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 MEOX1P50221 254 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 ARFIP1P53367 373 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 IRF9Q00978 393 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 SLC7A5Q01650 507 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 TGM3Q08188 693 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 SLC13A2Q13183 592 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 RCN2Q14257 317 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 SETDB1Q15047 1291 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 ACAP2Q15057 778 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 TMEM35AQ53FP2 167 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 UBAP2Q5T6F2 1119 aaKnown RBP9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 DEPDC1Q5TB30 811 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 GRHL2Q6ISB3 625 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 MED27Q6P2C8 311 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 RAPH1Q70E73 1250 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 MDGA2Q7Z553 956 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 CLNKQ7Z7G1 428 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 TBC1D1Q86TI0 1168 aaPredicted RBP9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 BIVMQ86UB2 503 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 CCDC25Q86WR0 208 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 DOLPP1Q86YN1 238 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 GPALPP1Q8IXQ4 340 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 ZNF321PQ8N8H1 164 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 LRRN4CLQ8ND94 238 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 MORN4Q8NDC4 146 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 OR8K3Q8NH51 312 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 DAZLQ92904 295 aaKnown RBP9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 NINJ1Q92982 152 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 TMEM125Q96AQ2 219 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 DMRTA2Q96SC8 542 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 SMR3AQ99954 134 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 LRRC1Q9BTT6 524 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 ZNF717Q9BY31 904 aaPredicted RBP9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 PSD3Q9NYI0 1048 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 MYOTQ9UBF9 498 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 OPTCQ9UBM4 332 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 ADGRE2Q9UHX3 823 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 FBXW2Q9UKT8 454 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 PPT2Q9UMR5 302 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 KLF13Q9Y2Y9 288 aaPredicted RBP9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 ACOT9Q9Y305 439 aa9.34□□□□□ -0.91
CLSTN3-203ENST00000534830 NINQ8N4C6 2090 aa9.33□□□□□ -0.92
CLSTN3-203ENST00000534830 NCKAP5O14513 1909 aa9.33□□□□□ -0.92
CLSTN3-203ENST00000534830 MYOCOSA0A1B0GUC4 107 aa9.33□□□□□ -0.92
CLSTN3-203ENST00000534830 ESYT3A0FGR9 886 aa9.33□□□□□ -0.92
CLSTN3-203ENST00000534830 SYCE1LA8MT33 242 aa9.33□□□□□ -0.92
CLSTN3-203ENST00000534830 SUPT3HB4E1H0 165 aa9.33□□□□□ -0.92
CLSTN3-203ENST00000534830 ZNHIT1O43257 154 aa9.33□□□□□ -0.92
CLSTN3-203ENST00000534830 PEX1O43933 1283 aa9.33□□□□□ -0.92
CLSTN3-203ENST00000534830 ZNF354AO60765 605 aaPredicted RBP9.33□□□□□ -0.92
CLSTN3-203ENST00000534830 LDB3O75112 727 aa9.33□□□□□ -0.92
CLSTN3-203ENST00000534830 SUPT3HO75486 399 aa9.33□□□□□ -0.92
CLSTN3-203ENST00000534830 KLHL2O95198 593 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms