RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 RAB28P51157 221 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 INHBCP55103 352 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 OC90Q02509 493 aaPredicted RBP16.81■□□□□ 0.28
PHRF1-205ENST00000533464 FAM180BQ6P0A1 224 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 LARP4Q71RC2 724 aaKnown RBP eCLIP16.81■□□□□ 0.28
PHRF1-205ENST00000533464 RASGRP3Q8IV61 690 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 UTP4Q969X6 686 aaKnown RBP16.81■□□□□ 0.28
PHRF1-205ENST00000533464 INPP5KQ9BT40 448 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 SLC46A2Q9BY10 475 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 RAB36O95755 333 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 GPX3P22352 226 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 ZXDBP98169 803 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 ZNF542PQ5EBM4 170 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 UNC5DQ6UXZ4 953 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 OR8H1Q8NGG4 311 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 C3orf30Q96M34 536 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 TM9SF2Q99805 663 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 C20orf27Q9GZN8 174 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.81■□□□□ 0.28
PHRF1-205ENST00000533464 MYH9P35579 1960 aaKnown RBP16.81■□□□□ 0.28
PHRF1-205ENST00000533464 ZNF726A6NNF4 738 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 C9J4A7 227 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 ADAMTS4O75173 837 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 CKMT1AP12532 417 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 C5AR1P21730 350 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 NTSR1P30989 418 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 HTRA3P83110 453 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 GRHL2Q6ISB3 625 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 SLC22A16Q86VW1 577 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 DOK4Q8TEW6 326 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 CCRL2O00421 344 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 PROM1O43490 865 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 GSTT2BP0CG30 244 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 DRD2P14416 443 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 RHCEP18577 417 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 MPP7Q5T2T1 576 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 ZSWIM9Q86XI8 627 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 C16orf78Q8WTQ4 265 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 SLC17A9Q9BYT1 436 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 KCNK12Q9HB15 430 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 PRTFDC1Q9NRG1 225 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 C14orf105Q9NVL8 296 aa16.81■□□□□ 0.28
PHRF1-205ENST00000533464 SLC35F4A4IF30 521 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 RCAN2Q14206 197 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 WSCD2Q2TBF2 565 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.8■□□□□ 0.285e-7■■■■□ 25.5
PHRF1-205ENST00000533464 NETO1Q8TDF5 533 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 TSACCQ96A04 125 aaPredicted RBP16.8■□□□□ 0.28
PHRF1-205ENST00000533464 TMEM125Q96AQ2 219 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 ZNF879B4DU55 563 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 CELP19835 753 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 SLC9A3P48764 834 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 CST9Q5W186 159 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 OR4C11Q6IEV9 310 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 HTR3DQ70Z44 454 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 HSD11B1LQ7Z5J1 315 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 THEM6Q8WUY1 208 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 SLC30A2Q9BRI3 323 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 ASPNQ9BXN1 380 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 KLRF1Q9NZS2 232 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 GMEB2Q9UKD1 530 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 ATXN1LP0C7T5 689 aaKnown RBP16.8■□□□□ 0.28
PHRF1-205ENST00000533464 RNF144AP50876 292 aaPredicted RBP16.8■□□□□ 0.28
PHRF1-205ENST00000533464 ARF5P84085 180 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 TMEM35AQ53FP2 167 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 PTCHD1Q96NR3 888 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 ATOH8Q96SQ7 321 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 SEC14L4Q9UDX3 406 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 MKLN1Q9UL63 735 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 ANHXE9PGG2 379 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 HK1P19367 917 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 ADRA1AP35348 466 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 CRISP1P54107 249 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 GRIN2CQ14957 1233 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 GALNT7Q86SF2 657 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 CHERPQ8IWX8 916 aaKnown RBP16.8■□□□□ 0.28
PHRF1-205ENST00000533464 OR51A7Q8NH64 312 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 KHSRPQ92945 711 aaKnown RBP eCLIP16.8■□□□□ 0.281e-7■□□□□ 11.1
PHRF1-205ENST00000533464 IFT46Q9NQC8 304 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 SDHAF3Q9NRP4 125 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 GNG8Q9UK08 70 aa16.8■□□□□ 0.28
PHRF1-205ENST00000533464 A0A1B0GVT2 93 aa16.79■□□□□ 0.28
PHRF1-205ENST00000533464 PFKLP17858 780 aa16.79■□□□□ 0.28
PHRF1-205ENST00000533464 WDR5P61964 334 aaKnown RBP16.79■□□□□ 0.28
PHRF1-205ENST00000533464 ELOCQ15369 112 aa16.79■□□□□ 0.28
PHRF1-205ENST00000533464 ANKDD1AQ495B1 522 aa16.79■□□□□ 0.28
PHRF1-205ENST00000533464 KCTD11Q693B1 232 aa16.79■□□□□ 0.28
PHRF1-205ENST00000533464 MSANTD1Q6ZTZ1 278 aa16.79■□□□□ 0.28
PHRF1-205ENST00000533464 OR4N5Q8IXE1 308 aa16.79■□□□□ 0.28
PHRF1-205ENST00000533464 LRRC25Q8N386 305 aaPredicted RBP16.79■□□□□ 0.28
PHRF1-205ENST00000533464 SUN3Q8TAQ9 357 aa16.79■□□□□ 0.28
PHRF1-205ENST00000533464 GPR174Q9BXC1 333 aa16.79■□□□□ 0.28
PHRF1-205ENST00000533464 SEC61A2Q9H9S3 476 aa16.79■□□□□ 0.28
PHRF1-205ENST00000533464 VAPAQ9P0L0 249 aa16.79■□□□□ 0.28
PHRF1-205ENST00000533464 TMEM181Q9P2C4 612 aa16.79■□□□□ 0.28
PHRF1-205ENST00000533464 OR5K4A6NMS3 321 aa16.79■□□□□ 0.28
PHRF1-205ENST00000533464 ARHGEF15O94989 841 aa16.79■□□□□ 0.28
PHRF1-205ENST00000533464 CBLP22681 906 aa16.79■□□□□ 0.28
PHRF1-205ENST00000533464 NNATQ16517 81 aa16.79■□□□□ 0.28
PHRF1-205ENST00000533464 CDKL4Q5MAI5 379 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms