RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 SEMA4CQ9C0C4 833 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 C20orf27Q9GZN8 174 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 RPF2Q9H7B2 306 aaKnown RBP11.24□□□□□ -0.61
SSBP3-214ENST00000533209 TEX10Q9NXF1 929 aaPredicted RBP11.24□□□□□ -0.61
SSBP3-214ENST00000533209 NKIRAS1Q9NYS0 192 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 ZDHHC2Q9UIJ5 367 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 MCM8Q9UJA3 840 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 PCDHGA9Q9Y5G4 932 aaKnown RBP11.24□□□□□ -0.61
SSBP3-214ENST00000533209 PTGDR2Q9Y5Y4 395 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 NUP210LQ5VU65 1888 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 ARHGAP10A1A4S6 786 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 WASHC1A8K0Z3 465 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 HMGB1P1B2RPK0 211 aaPredicted RBP11.23□□□□□ -0.61
SSBP3-214ENST00000533209 NPIPB8E9PQR5 432 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 FGF17O60258 216 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 LDB3O75112 727 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 RSL1D1O76021 490 aaKnown RBP11.23□□□□□ -0.61
SSBP3-214ENST00000533209 HSPA4LO95757 839 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 CHEK2O96017 543 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 PDGFAP04085 211 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 CELA2AP08217 269 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 PRR35P0CG20 571 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 NR2F6P10588 404 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 ITGA3P26006 1051 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 PPP2R1BP30154 601 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 TLX1P31314 330 aaPredicted RBP11.23□□□□□ -0.61
SSBP3-214ENST00000533209 BUD31P41223 144 aaPredicted RBP11.23□□□□□ -0.61
SSBP3-214ENST00000533209 MAPK12P53778 367 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 IGLV3-21P80748 117 aaPredicted RBP11.23□□□□□ -0.61
SSBP3-214ENST00000533209 BTKQ06187 659 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 ACSM2AQ08AH3 577 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 RAPSNQ13702 412 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 MYBPC3Q14896 1274 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 IMPG1Q17R60 797 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 SPIN4Q56A73 249 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 ACSM2BQ68CK6 577 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 PLAG1Q6DJT9 500 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 TCTN3Q6NUS6 607 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 GALNT18Q6P9A2 607 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 Q6ZSR9 355 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 KBTBD2Q8IY47 623 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 OR2T11Q8NH01 316 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 C9orf43Q8TAL5 461 aaPredicted RBP11.23□□□□□ -0.61
SSBP3-214ENST00000533209 TWIST2Q8WVJ9 160 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 TANKQ92844 425 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 TM4SF18Q96CE8 201 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 SORT1Q99523 831 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 LPAR4Q99677 370 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 SLC25A23Q9BV35 468 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 NUDT9Q9BW91 350 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 ALOXE3Q9BYJ1 711 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 ZNF552Q9H707 407 aaPredicted RBP11.23□□□□□ -0.61
SSBP3-214ENST00000533209 SIRT5Q9NXA8 310 aa11.23□□□□□ -0.61
SSBP3-214ENST00000533209 GLOD5A6NK44 160 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 A8MUA0 341 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 SLC28A1O00337 649 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 PIP5K1BO14986 540 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 PCDH7O60245 1069 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 SERPINA7P05543 415 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 LINC00032P0C843 101 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 ITGAMP11215 1152 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 SFTPCP11686 197 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 NEFHP12036 1026 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 NR1D1P20393 614 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 PRPH2P23942 346 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 TIA1P31483 386 aaKnown RBP eCLIP11.22□□□□□ -0.61
SSBP3-214ENST00000533209 SLC1A6P48664 564 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 SLC26A5P58743 744 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 TRA2BP62995 288 aaKnown RBP11.22□□□□□ -0.61
SSBP3-214ENST00000533209 ID2Q02363 134 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 FOLH1Q04609 750 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 BST1Q10588 318 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 STX3Q13277 289 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 BTBD16Q32M84 506 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 SPDYAQ5MJ70 313 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 NDUFAF5Q5TEU4 345 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 RIPOR1Q6ZS17 1223 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 HOMEZQ8IX15 550 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 OR4N5Q8IXE1 308 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 MMP21Q8N119 569 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 GOLGA6L1Q8N7Z2 621 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 ZNF781Q8N8C0 355 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 NFAM1Q8NET5 270 aaPredicted RBP11.22□□□□□ -0.61
SSBP3-214ENST00000533209 DNAJB14Q8TBM8 379 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 SLC39A7Q92504 469 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 PSMF1Q92530 271 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 THOC3Q96J01 351 aaKnown RBP11.22□□□□□ -0.61
SSBP3-214ENST00000533209 SMAD5Q99717 465 aaKnown RBP11.22□□□□□ -0.61
SSBP3-214ENST00000533209 LHPPQ9H008 270 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 PNO1Q9NRX1 252 aaKnown RBP11.22□□□□□ -0.61
SSBP3-214ENST00000533209 GPR83Q9NYM4 423 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 HAO1Q9UJM8 370 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 TP53TG5Q9Y2B4 290 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.22□□□□□ -0.61
SSBP3-214ENST00000533209 RAP2CQ9Y3L5 183 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 PCDHA9Q9Y5H5 950 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 CFAP46Q8IYW2 2715 aa11.22□□□□□ -0.61
SSBP3-214ENST00000533209 GNG14A0A1W2PPG7 69 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 SYNDIG1LA6NDD5 238 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 SAGE2PA6NJ88 616 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms