RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 MDFIQ99750 246 aa12.02□□□□□ -0.49
COPB1-209ENST00000533096 YIPF4Q9BSR8 244 aa12.02□□□□□ -0.49
COPB1-209ENST00000533096 REXO4Q9GZR2 422 aaKnown RBP12.02□□□□□ -0.49
COPB1-209ENST00000533096 GTF3C1Q12789 2109 aa12.02□□□□□ -0.49
COPB1-209ENST00000533096 NIPBLQ6KC79 2804 aaeCLIP12.01□□□□□ -0.493e-11■■■■□ 20
COPB1-209ENST00000533096 CACNA1CQ13936 2221 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 NPEPPSL1A6NEC2 478 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 NCF1BA6NI72 391 aaPredicted RBP12.01□□□□□ -0.49
COPB1-209ENST00000533096 NCF1CA8MVU1 366 aaPredicted RBP12.01□□□□□ -0.49
COPB1-209ENST00000533096 ACSL3O95573 720 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 IL2RAP01589 272 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 ENO2P09104 434 aaPredicted RBP12.01□□□□□ -0.49
COPB1-209ENST00000533096 CCDC175P0C221 793 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 EPXP11678 715 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 NCF1P14598 390 aaPredicted RBP12.01□□□□□ -0.49
COPB1-209ENST00000533096 GNAZP19086 355 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 PCSK6P29122 969 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 PEX19P40855 299 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 ASCL1P50553 236 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 MTTPP55157 894 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 RCN2Q14257 317 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 CRYMQ14894 314 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 EFTUD2Q15029 972 aaKnown RBP eCLIP12.01□□□□□ -0.491e-8■■■■□ 22.8
COPB1-209ENST00000533096 DAZAP2Q15038 168 aaPredicted RBP12.01□□□□□ -0.49
COPB1-209ENST00000533096 TOMM20Q15388 145 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 HYAL4Q2M3T9 481 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 PIGGQ5H8A4 983 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 PAMR1Q6UXH9 720 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 SLCO4C1Q6ZQN7 724 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 KRT78Q8N1N4 520 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 NAT8LQ8N9F0 302 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 LRRN4CLQ8ND94 238 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 CFAP36Q96G28 342 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 SENP5Q96HI0 755 aaPredicted RBP12.01□□□□□ -0.49
COPB1-209ENST00000533096 MS4A14Q96JA4 679 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 SERINC2Q96SA4 455 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 ZFP64Q9NPA5 681 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 COPS7AQ9UBW8 275 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 MTRF1LQ9UGC7 380 aaKnown RBP12.01□□□□□ -0.49
COPB1-209ENST00000533096 DAPP1Q9UN19 280 aa12.01□□□□□ -0.49
COPB1-209ENST00000533096 KIAA1324LA8MWY0 1029 aaPredicted RBP12□□□□□ -0.49
COPB1-209ENST00000533096 AHRRA9YTQ3 701 aa12□□□□□ -0.49
COPB1-209ENST00000533096 SMAD7O15105 426 aaKnown RBP12□□□□□ -0.49
COPB1-209ENST00000533096 LY6G6DO95868 133 aa12□□□□□ -0.49
COPB1-209ENST00000533096 GDF1P27539 372 aa12□□□□□ -0.49
COPB1-209ENST00000533096 HOXC12P31275 282 aa12□□□□□ -0.49
COPB1-209ENST00000533096 MSH2P43246 934 aa12□□□□□ -0.49
COPB1-209ENST00000533096 MAGEA3P43357 314 aa12□□□□□ -0.49
COPB1-209ENST00000533096 DUSP8Q13202 625 aa12□□□□□ -0.49
COPB1-209ENST00000533096 PCBP2Q15366 365 aaKnown RBP eCLIP12□□□□□ -0.492e-11■■■■■ 33.8
COPB1-209ENST00000533096 BBS9Q3SYG4 887 aa12□□□□□ -0.49
COPB1-209ENST00000533096 FBXO48Q5FWF7 155 aa12□□□□□ -0.49
COPB1-209ENST00000533096 TEDDM1Q5T9Z0 273 aa12□□□□□ -0.49
COPB1-209ENST00000533096 ADNP2Q6IQ32 1131 aa12□□□□□ -0.49
COPB1-209ENST00000533096 ABHD17CQ6PCB6 329 aa12□□□□□ -0.49
COPB1-209ENST00000533096 CCDC137Q6PK04 289 aaKnown RBP12□□□□□ -0.49
COPB1-209ENST00000533096 SBSNQ6UWP8 590 aa12□□□□□ -0.49
COPB1-209ENST00000533096 KIF18BQ86Y91 864 aa12□□□□□ -0.49
COPB1-209ENST00000533096 IGDCC3Q8IVU1 814 aa12□□□□□ -0.49
COPB1-209ENST00000533096 FBXW8Q8N3Y1 598 aa12□□□□□ -0.49
COPB1-209ENST00000533096 OR2L5Q8NG80 312 aa12□□□□□ -0.49
COPB1-209ENST00000533096 NEIL3Q8TAT5 605 aa12□□□□□ -0.49
COPB1-209ENST00000533096 ESAMQ96AP7 390 aa12□□□□□ -0.49
COPB1-209ENST00000533096 RBM18Q96H35 190 aaKnown RBP12□□□□□ -0.49
COPB1-209ENST00000533096 TRIB1Q96RU8 372 aa12□□□□□ -0.49
COPB1-209ENST00000533096 TIMP4Q99727 224 aa12□□□□□ -0.49
COPB1-209ENST00000533096 SH3GL2Q99962 352 aa12□□□□□ -0.49
COPB1-209ENST00000533096 MAPKAP1Q9BPZ7 522 aa12□□□□□ -0.49
COPB1-209ENST00000533096 BOKQ9UMX3 212 aaPredicted RBP12□□□□□ -0.49
COPB1-209ENST00000533096 CAMK2AQ9UQM7 478 aa12□□□□□ -0.49
COPB1-209ENST00000533096 NAV3Q8IVL0 2385 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 EEF1E1-BLOC1S5C9J1V9 151 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 HRKO00198 91 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 RTCAO00442 366 aaKnown RBP11.99□□□□□ -0.49
COPB1-209ENST00000533096 EEF1E1O43324 174 aaKnown RBP11.99□□□□□ -0.49
COPB1-209ENST00000533096 CLEC3AO75596 197 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 EPPINO95925 133 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 TGM3Q08188 693 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 SERTAD2Q14140 314 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 ZNF460Q14592 562 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 ZNF791Q3KP31 576 aaPredicted RBP11.99□□□□□ -0.49
COPB1-209ENST00000533096 MSS51Q4VC12 460 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 SPANXN3Q5MJ09 141 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 TMEM64Q6YI46 380 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 FRA10AC1Q70Z53 315 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 MAATS1Q7Z4T9 603 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 PPIL6Q8IXY8 311 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 SNX31Q8N9S9 440 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 TTLQ8NG68 377 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 SLC22A8Q8TCC7 542 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 ZNF721Q8TF20 911 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 PDLIM5Q96HC4 596 aaKnown RBP11.99□□□□□ -0.49
COPB1-209ENST00000533096 DGAT2Q96PD7 388 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 GAL3ST4Q96RP7 486 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 PLEKHF2Q9H8W4 249 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 PRDM7Q9NQW5 492 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 CTNNAL1Q9UBT7 734 aa11.99□□□□□ -0.49
COPB1-209ENST00000533096 ZNF629Q9UEG4 869 aaPredicted RBP11.99□□□□□ -0.49
COPB1-209ENST00000533096 ZNF490Q9ULM2 529 aaPredicted RBP11.99□□□□□ -0.49
COPB1-209ENST00000533096 SLC6A5Q9Y345 797 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms