RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 MEAF6Q9HAF1 191 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 C19orf25Q9UFG5 118 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 PSME2Q9UL46 239 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 EIF3LQ9Y262 564 aaKnown RBP10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 DLGAP4Q9Y2H0 992 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 POLR3HQ9Y535 204 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 C1orf226A1L170 272 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 SYNDIG1LA6NDD5 238 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 ERICH4A6NGS2 130 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 EBAG9O00559 213 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 NDUFAB1O14561 156 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 TGDSO95455 350 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 AIFM1O95831 613 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 FURINP09958 794 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 NR2F6P10588 404 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 ACPPP15309 386 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 MAOAP21397 527 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 LSP1P33241 339 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 TAS2R50P59544 299 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 EMX2Q04743 252 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 C2orf80Q0P641 193 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 CDC20Q12834 499 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 MAD2L1Q13257 205 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 SERTAD2Q14140 314 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 HEPACAMQ14CZ8 416 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 NDUFAF5Q5TEU4 345 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 KIRREL2Q6UWL6 708 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 PPP1R32Q7Z5V6 425 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 LRRC34Q8IZ02 419 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 TMEM132CQ8N3T6 1108 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 TMEM52Q8NDY8 209 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 ADAMTS17Q8TE56 1095 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 FER1L6-AS2Q96M78 137 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 EBPLQ9BY08 206 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 ALOXE3Q9BYJ1 711 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 NECTIN3Q9NQS3 549 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 TEX10Q9NXF1 929 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 P4HTMQ9NXG6 502 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 POLHQ9Y253 713 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 PCDHA9Q9Y5H5 950 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 HS3ST3B1Q9Y662 390 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 USH1CQ9Y6N9 552 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 DMXL2Q8TDJ6 3036 aa10.56□□□□□ -0.72
TRAPPC4-211ENST00000533012 LOC102723996A0A087X1L8 192 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 GLOD5A6NK44 160 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 SOCS6O14544 535 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 PGRMC2O15173 223 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 EDF1O60869 148 aaKnown RBP10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 DIAPH2O60879 1101 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 LDB3O75112 727 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 GPR75O95800 540 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 FAM107AO95990 144 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 VIMP08670 466 aaKnown RBP10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 IL3P08700 152 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 PRPS2P11908 318 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 BCKDHAP12694 445 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 LBPP18428 481 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 ALDH9A1P49189 494 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 HNRNPFP52597 415 aaKnown RBP10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 EFNA3P52797 238 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 OR4D2P58180 307 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 ZNF763Q0D2J5 394 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 DEFB109BQ30KR1 87 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 ATP1A1-AS1Q5TC04 95 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 VWA5B1Q5TIE3 1220 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 IL23RQ5VWK5 629 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 NXNQ6DKJ4 435 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 OR52E8Q6IFG1 317 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 LARP4Q71RC2 724 aaKnown RBP eCLIP10.55□□□□□ -0.724e-8■■□□□ 13.7
TRAPPC4-211ENST00000533012 NDUFAF7Q7L592 441 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 CPEB2Q7Z5Q1 589 aaKnown RBP10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 ANKRD37Q7Z713 158 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 CLNKQ7Z7G1 428 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 MRGPREQ86SM8 312 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 SCUBE1Q8IWY4 988 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 OR4N5Q8IXE1 308 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 OR4K14Q8NGD5 310 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 CDC26Q8NHZ8 85 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 SNRNP27Q8WVK2 155 aaKnown RBP10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 TSLPQ969D9 159 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 C8orf44Q96CB5 159 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 RBM18Q96H35 190 aaKnown RBP10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 FCRL1Q96LA6 429 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 CCDC134Q9H6E4 229 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 WDR55Q9H6Y2 383 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 MYNNQ9NPC7 610 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 GIMAP2Q9UG22 337 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 MAN2B2Q9Y2E5 1009 aa10.55□□□□□ -0.72
TRAPPC4-211ENST00000533012 AHCTF1Q8WYP5 2266 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 IGKV3D-11A0A0A0MRZ8 115 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 TCRBV16S1A1N1A0A5B0 115 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 GMNCA6NCL1 334 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 WASHC1A8K0Z3 465 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 SDHDO14521 159 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 ZNF195O14628 629 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 PRKRAO75569 313 aaKnown RBP10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 IFNA16P05015 189 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 PRR35P0CG20 571 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 ICAM2P13598 275 aa10.54□□□□□ -0.72
TRAPPC4-211ENST00000533012 SDC1P18827 310 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms