RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 HSD17B1P14061 328 aa2.3□□□□□ -2.04
ATM-217ENST00000531957 CALML3P27482 149 aa2.3□□□□□ -2.04
ATM-217ENST00000531957 PPP2R1BP30154 601 aa2.3□□□□□ -2.04
ATM-217ENST00000531957 HMGCLP35914 325 aa2.3□□□□□ -2.04
ATM-217ENST00000531957 OR3A1P47881 315 aa2.3□□□□□ -2.04
ATM-217ENST00000531957 EIF4EBP2Q13542 120 aaPredicted RBP2.3□□□□□ -2.04
ATM-217ENST00000531957 CCL14Q16627 93 aa2.3□□□□□ -2.04
ATM-217ENST00000531957 PLPP4Q5VZY2 271 aa2.3□□□□□ -2.04
ATM-217ENST00000531957 ZNF776Q68DI1 518 aaPredicted RBP2.3□□□□□ -2.04
ATM-217ENST00000531957 PM20D1Q6GTS8 502 aa2.3□□□□□ -2.04
ATM-217ENST00000531957 ZNF770Q6IQ21 691 aaPredicted RBP2.3□□□□□ -2.04
ATM-217ENST00000531957 RFWD3Q6PCD5 774 aa2.3□□□□□ -2.04
ATM-217ENST00000531957 SHQ1Q6PI26 577 aaKnown RBP2.3□□□□□ -2.04
ATM-217ENST00000531957 SPATA19Q7Z5L4 167 aa2.3□□□□□ -2.04
ATM-217ENST00000531957 ZNF444Q8N0Y2 327 aaPredicted RBP2.3□□□□□ -2.04
ATM-217ENST00000531957 SLC22A18ASQ8N1D0 253 aa2.3□□□□□ -2.04
ATM-217ENST00000531957 ICA1LQ8NDH6 482 aa2.3□□□□□ -2.04
ATM-217ENST00000531957 Q8NFD4 153 aa2.3□□□□□ -2.04
ATM-217ENST00000531957 C8orf46Q8TAG6 207 aa2.3□□□□□ -2.04
ATM-217ENST00000531957 SGF29Q96ES7 293 aa2.3□□□□□ -2.04
ATM-217ENST00000531957 PHYHIPLQ96FC7 376 aa2.3□□□□□ -2.04
ATM-217ENST00000531957 BAG1Q99933 345 aaPredicted RBP2.3□□□□□ -2.04
ATM-217ENST00000531957 MAPKAP1Q9BPZ7 522 aa2.3□□□□□ -2.04
ATM-217ENST00000531957 NT5DC2Q9H857 520 aa2.3□□□□□ -2.04
ATM-217ENST00000531957 ELL3Q9HB65 397 aaPredicted RBP2.3□□□□□ -2.04
ATM-217ENST00000531957 ITGA11Q9UKX5 1188 aa2.3□□□□□ -2.04
ATM-217ENST00000531957 FAM205AQ6ZU69 1335 aa2.3□□□□□ -2.04
ATM-217ENST00000531957 PFASO15067 1338 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 KLF18A0A0U1RQI7 1052 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 C5orf52A6NGY3 159 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 ANKDD1BA6NHY2 528 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 M0R296 226 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 MCF2LO15068 1137 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 CTDSPLO15194 276 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 P2RX6O15547 441 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 SELENOFO60613 162 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 DKC1O60832 514 aaKnown RBP eCLIP2.29□□□□□ -2.04
ATM-217ENST00000531957 LETM1O95202 739 aaPredicted RBP2.29□□□□□ -2.04
ATM-217ENST00000531957 KRT3P12035 628 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 FNTAP49354 379 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 FKBP1BP68106 108 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 AKAP17AQ02040 695 aaKnown RBP2.29□□□□□ -2.04
ATM-217ENST00000531957 SLC3A1Q07837 685 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 GPR50Q13585 617 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 PCK2Q16822 640 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 TWISTNBQ3B726 338 aaPredicted RBP2.29□□□□□ -2.04
ATM-217ENST00000531957 IQCCQ4KMZ1 466 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 C2orf83Q53S99 150 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 ABRAXAS1Q6UWZ7 409 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 PAMR1Q6UXH9 720 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 VASH2Q86V25 355 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 ZNRF1Q8ND25 227 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 GTSF1Q8WW33 167 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 C17orf62Q9BQA9 187 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 CCM2Q9BSQ5 444 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 CUEDC2Q9H467 287 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 ZNF665Q9H7R5 613 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 ZNF275Q9NSD4 429 aaPredicted RBP2.29□□□□□ -2.04
ATM-217ENST00000531957 EIF3KQ9UBQ5 218 aaKnown RBP2.29□□□□□ -2.04
ATM-217ENST00000531957 POMT1Q9Y6A1 747 aa2.29□□□□□ -2.04
ATM-217ENST00000531957 COL4A4P53420 1690 aaPredicted RBP2.28□□□□□ -2.04
ATM-217ENST00000531957 TRAV34A0A0B4J273 112 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 YDJCA8MPS7 323 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 ZNF724A8MTY0 619 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 TNFSF11O14788 317 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 FRAT2O75474 233 aaPredicted RBP2.28□□□□□ -2.04
ATM-217ENST00000531957 OR6A2O95222 327 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 GSTA2P09210 222 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 MGMTP16455 207 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 FASP25445 335 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 CCND3P30281 292 aaPredicted RBP2.28□□□□□ -2.04
ATM-217ENST00000531957 FHITP49789 147 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 GSG1Q2KHT4 349 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 ODF2Q5BJF6 829 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 PET117Q6UWS5 81 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 ZNF600Q6ZNG1 722 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 METTL23Q86XA0 190 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 CACUL1Q86Y37 369 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 CCDC71Q8IV32 467 aaPredicted RBP2.28□□□□□ -2.04
ATM-217ENST00000531957 THNSL1Q8IYQ7 743 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 CCDC197Q8NCU1 140 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 TBCKQ8TEA7 893 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 GANCQ8TET4 914 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 CKAP2Q8WWK9 683 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 TCP11Q8WWU5 503 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 DNASE1L2Q92874 299 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 ESAMQ96AP7 390 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 CDHR1Q96JP9 859 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 ERGIC2Q96RQ1 377 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 ATG101Q9BSB4 218 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 ZBP1Q9H171 429 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 ASB8Q9H765 288 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 SWAP70Q9UH65 585 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 CLEC4EQ9ULY5 219 aa2.28□□□□□ -2.04
ATM-217ENST00000531957 HDAC3O15379 428 aa2.27□□□□□ -2.05
ATM-217ENST00000531957 KIAA0513O60268 411 aa2.27□□□□□ -2.05
ATM-217ENST00000531957 CSO75390 466 aaKnown RBP2.27□□□□□ -2.05
ATM-217ENST00000531957 RAD51DO75771 328 aa2.27□□□□□ -2.05
ATM-217ENST00000531957 ANXA9O76027 345 aa2.27□□□□□ -2.05
ATM-217ENST00000531957 FHP07954 510 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms