RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 PTCD3Q96EY7 689 aaKnown RBP17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 RUNDC3BQ96NL0 473 aa17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 CNPPD1Q9BV87 410 aa17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 EHD1Q9H4M9 534 aa17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 IL1RL2Q9HB29 575 aa17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 POPDC3Q9HBV1 291 aa17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 SACM1LQ9NTJ5 587 aa17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 TUBA8Q9NY65 449 aaPredicted RBP17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 KCNN3Q9UGI6 736 aa17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 NAV3Q8IVL0 2385 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 A0A0G2JNJ9 132 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 OR14I1A6ND48 311 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 FIGNL2A6NMB9 653 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 CCDC166P0CW27 439 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 CD1EP15812 388 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 EPORP19235 508 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 DNAJA1P31689 397 aaKnown RBP17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 GMPRP36959 345 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 KCNC1P48547 511 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 SLC12A2P55011 1212 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 TGM3Q08188 693 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 FOXO1Q12778 655 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 RCN2Q14257 317 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 PDK4Q16654 411 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 CES4AQ5XG92 561 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 SYDE1Q6ZW31 735 aaPredicted RBP17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 TCAIMQ8N3R3 496 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 GOLM1Q8NBJ4 401 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 ZNF721Q8TF20 911 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 EXT2Q93063 718 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 ANKRD9Q96BM1 317 aaPredicted RBP17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 WDR34Q96EX3 536 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 KCNC2Q96PR1 638 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 CNOT10Q9H9A5 744 aaKnown RBP17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 LYRM4Q9HD34 91 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 TRMT1Q9NXH9 659 aaKnown RBP17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 Q9UFV3 132 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 ATG4BQ9Y4P1 393 aa17.03■□□□□ 0.32
SSSCA1-206ENST00000531405 FLNAP21333 2647 aaKnown RBP17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 KIAA1549Q9HCM3 1950 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 ABCA4P78363 2273 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 A0A1B0GVC2 190 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 SYNDIG1LA6NDD5 238 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 CXorf49A8MYA2 514 aaPredicted RBP17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 AQP7O14520 342 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 STK16O75716 305 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 ZWINTO95229 277 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 P04436 131 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 CD1DP15813 335 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 ATP5A1P25705 553 aaKnown RBP17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 PIGAP37287 484 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 ADH7P40394 386 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 MSH2P43246 934 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 ZFP36L2P47974 494 aaKnown RBP17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 MAN2A2P49641 1150 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 DLX5P56178 289 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 POU4F1Q01851 419 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 ASPHQ12797 758 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 SNTB1Q13884 538 aaKnown RBP17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 SERTAD2Q14140 314 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 SULT1C3Q6IMI6 304 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 OPN5Q6U736 354 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 OR4N5Q8IXE1 308 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 ZBED8Q8IZ13 594 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 CLYBLQ8N0X4 340 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 ACOT4Q8N9L9 421 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 OR8K3Q8NH51 312 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 KIAA1191Q96A73 305 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 EFCAB11Q9BUY7 163 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 MS4A8Q9BY19 250 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 LDAHQ9H6V9 325 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 PRM3Q9NNZ6 103 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 NSMCE4AQ9NXX6 385 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 CD274Q9NZQ7 290 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 COPS7AQ9UBW8 275 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 ACAD8Q9UKU7 415 aa17.02■□□□□ 0.32
SSSCA1-206ENST00000531405 E7ESA3 106 aa17.01■□□□□ 0.31
SSSCA1-206ENST00000531405 HRKO00198 91 aa17.01■□□□□ 0.31
SSSCA1-206ENST00000531405 SAP18O00422 153 aaKnown RBP17.01■□□□□ 0.31
SSSCA1-206ENST00000531405 FGF17O60258 216 aa17.01■□□□□ 0.31
SSSCA1-206ENST00000531405 CCNT2O60583 730 aaKnown RBP17.01■□□□□ 0.31
SSSCA1-206ENST00000531405 TCP1P17987 556 aaKnown RBP17.01■□□□□ 0.31
SSSCA1-206ENST00000531405 ENDOUP21128 410 aaKnown RBP17.01■□□□□ 0.31
SSSCA1-206ENST00000531405 IRF8Q02556 426 aa17.01■□□□□ 0.31
SSSCA1-206ENST00000531405 CHIT1Q13231 466 aa17.01■□□□□ 0.31
SSSCA1-206ENST00000531405 DGAT2L6Q6ZPD8 337 aa17.01■□□□□ 0.31
SSSCA1-206ENST00000531405 OR5L2Q8NGL0 311 aa17.01■□□□□ 0.31
SSSCA1-206ENST00000531405 DOK4Q8TEW6 326 aa17.01■□□□□ 0.31
SSSCA1-206ENST00000531405 ZNF473Q8WTR7 871 aaKnown RBP17.01■□□□□ 0.31
SSSCA1-206ENST00000531405 SGCZQ96LD1 299 aa17.01■□□□□ 0.31
SSSCA1-206ENST00000531405 SORBS1Q9BX66 1292 aaKnown RBP17.01■□□□□ 0.31
SSSCA1-206ENST00000531405 EXO5Q9H790 373 aa17.01■□□□□ 0.31
SSSCA1-206ENST00000531405 ALKBH4Q9NXW9 302 aa17.01■□□□□ 0.31
SSSCA1-206ENST00000531405 SPRR3Q9UBC9 169 aa17.01■□□□□ 0.31
SSSCA1-206ENST00000531405 PTBP2Q9UKA9 531 aaKnown RBP17.01■□□□□ 0.31
SSSCA1-206ENST00000531405 L3MBTL1Q9Y468 752 aa17.01■□□□□ 0.31
SSSCA1-206ENST00000531405 SUSD5O60279 629 aa17■□□□□ 0.31
SSSCA1-206ENST00000531405 TGFB1P01137 390 aa17■□□□□ 0.31
SSSCA1-206ENST00000531405 PCNAP12004 261 aa17■□□□□ 0.31
SSSCA1-206ENST00000531405 HIST1H1TP22492 207 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms