RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 CRB2Q5IJ48 1285 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 CATSPEREQ5SY80 951 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 C9orf50Q5SZB4 431 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 OTUD3Q5T2D3 398 aaPredicted RBP5.3□□□□□ -1.56
PCF11-205ENST00000530906 CWF19L1Q69YN2 538 aaKnown RBP5.3□□□□□ -1.56
PCF11-205ENST00000530906 KDM4DQ6B0I6 523 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 BHLHB9Q6PI77 547 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 SYCE2Q6PIF2 218 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 SPESP1Q6UW49 350 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 FAM83HQ6ZRV2 1179 aaPredicted RBP5.3□□□□□ -1.56
PCF11-205ENST00000530906 EP400NLQ6ZTU2 488 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 TRIM74Q86UV6 250 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 TSPYL5Q86VY4 417 aaPredicted RBP5.3□□□□□ -1.56
PCF11-205ENST00000530906 ANKRD46Q86W74 232 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.3□□□□□ -1.56
PCF11-205ENST00000530906 SPACA3Q8IXA5 215 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 PHACTR4Q8IZ21 702 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 HDDC3Q8N4P3 179 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 TP53I13Q8NBR0 393 aaPredicted RBP5.3□□□□□ -1.56
PCF11-205ENST00000530906 PIK3C3Q8NEB9 887 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 OR4A15Q8NGL6 344 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 OR5AR1Q8NGP9 310 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 PSMA8Q8TAA3 256 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 GPBAR1Q8TDU6 330 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 ZFPM2Q8WW38 1151 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 GEMIN6Q8WXD5 167 aaKnown RBP5.3□□□□□ -1.56
PCF11-205ENST00000530906 DNASE1L2Q92874 299 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 SLC22A18Q96BI1 424 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 MOAP1Q96BY2 351 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 NEURL3Q96EH8 262 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 ZBED6CLQ96FA7 236 aaPredicted RBP5.3□□□□□ -1.56
PCF11-205ENST00000530906 DMRTB1Q96MA1 342 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 DOK1Q99704 481 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 SLC35A5Q9BS91 424 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 DOHHQ9BU89 302 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 MENTQ9BUN1 341 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 FAIM2Q9BWQ8 316 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 MS4A8Q9BY19 250 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 RBCK1Q9BYM8 510 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 KRTAP4-2Q9BYR5 136 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 SLC17A9Q9BYT1 436 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 NLNQ9BYT8 704 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 ROGDIQ9GZN7 287 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 BTBD1Q9H0C5 482 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 TOR3AQ9H497 397 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 DDX31Q9H8H2 851 aaKnown RBP5.3□□□□□ -1.56
PCF11-205ENST00000530906 REEP1Q9H902 201 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 SLC6A13Q9NSD5 602 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 TMEM184CQ9NVA4 438 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 SH3BP4Q9P0V3 963 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 USP22Q9UPT9 525 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 NCKAP1Q9Y2A7 1128 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 NAALAD2Q9Y3Q0 740 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 PCDHGB1Q9Y5G3 927 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 COLEC10Q9Y6Z7 277 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 NUMA1Q14980 2115 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 LOC100130705A0A1B0GUX0 176 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 ZNF503-AS2A6NEH8 195 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 CCDC160A6NGH7 325 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 TRIM64BA6NI03 449 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 GRXCR1A8MXD5 290 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 ANHXE9PGG2 379 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 PLOD2O00469 737 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 BCKDKO14874 412 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 NDUFS4O43181 175 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 TRMUO75648 421 aaKnown RBP5.29□□□□□ -1.56
PCF11-205ENST00000530906 GNAO1P09471 354 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 ANXA8P13928 327 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 NME2P22392 152 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 CRHBPP24387 322 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 DCKP27707 260 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 HTR1BP28222 390 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 TPP2P29144 1249 aaPredicted RBP5.29□□□□□ -1.56
PCF11-205ENST00000530906 SHMT2P34897 504 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 BSGP35613 385 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 CHI3L1P36222 383 aaPredicted RBP5.29□□□□□ -1.56
PCF11-205ENST00000530906 PEX19P40855 299 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 MVDP53602 400 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 TMBIM6P55061 237 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 PCBP3P57721 371 aaKnown RBP5.29□□□□□ -1.56
PCF11-205ENST00000530906 SMIM11AP58511 58 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 TAS2R50P59544 299 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 YPEL5P62699 121 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 SELENOWP63302 87 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 HBA1P69905 142 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 HYAL1Q12794 435 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 KCNAB2Q13303 367 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 ADAM15Q13444 863 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 TSTA3Q13630 321 aaPredicted RBP5.29□□□□□ -1.56
PCF11-205ENST00000530906 SCARB2Q14108 478 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 SHHQ15465 462 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 NKPD1Q17RQ9 610 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 ADPRMQ3LIE5 342 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 IFI44LQ53G44 452 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 C6orf141Q5SZD1 244 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 ZNF691Q5VV52 312 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 PRAMEF8Q5VWM4 474 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 PRAMEF7Q5VXH5 474 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 KIAA1614Q5VZ46 1190 aa5.29□□□□□ -1.56
PCF11-205ENST00000530906 FAM109BQ6ICB4 259 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms