RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 EHD3Q9NZN3 535 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.36■□□□□ 0.21
BRCA2-204ENST00000530893 TMEM247A6NEH6 219 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 EFCAB9A8MZ26 197 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 RTCAO00442 366 aaKnown RBP16.36■□□□□ 0.21
BRCA2-204ENST00000530893 MFN2O95140 757 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 PCDH8O95206 1070 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 KAT7O95251 611 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 OXSR1O95747 527 aaPredicted RBP16.36■□□□□ 0.21
BRCA2-204ENST00000530893 RECKO95980 971 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 DRD2P14416 443 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 FCARP24071 287 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 GJA4P35212 333 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 CLCNKAP51800 687 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 TAS2R38P59533 333 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 ITGADQ13349 1161 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 KIAA1161Q6NSJ0 714 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 C6orf120Q7Z4R8 191 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 ADGRD2Q7Z7M1 963 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 PLD3Q8IV08 490 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 AQP11Q8NBQ7 271 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 OR6Q1Q8NGQ2 317 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 C9orf43Q8TAL5 461 aaPredicted RBP16.36■□□□□ 0.21
BRCA2-204ENST00000530893 UTP15Q8TED0 518 aaKnown RBP16.36■□□□□ 0.21
BRCA2-204ENST00000530893 CRELD1Q96HD1 420 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 ZNF607Q96SK3 696 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 RSPH9Q9H1X1 276 aaPredicted RBP16.36■□□□□ 0.21
BRCA2-204ENST00000530893 LHX9Q9NQ69 397 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 TM7SF3Q9NS93 570 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 OSGIN1Q9UJX0 560 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 DUSP12Q9UNI6 340 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 CFAP20Q9Y6A4 193 aaKnown RBP16.36■□□□□ 0.21
BRCA2-204ENST00000530893 TRPM6Q9BX84 2022 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 KPNA4O00629 521 aaPredicted RBP16.35■□□□□ 0.21
BRCA2-204ENST00000530893 KCNJ13O60928 360 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 ADH1BP00325 375 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 ADAP00813 363 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 BCHEP06276 602 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 C21orf33P30042 268 aaPredicted RBP16.35■□□□□ 0.21
BRCA2-204ENST00000530893 CTSKP43235 329 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 GSSP48637 474 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 NCS1P62166 190 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 LSM3P62310 102 aaKnown RBP16.35■□□□□ 0.21
BRCA2-204ENST00000530893 PRDX1Q06830 199 aaKnown RBP16.35■□□□□ 0.21
BRCA2-204ENST00000530893 GPM6BQ13491 265 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 PUM1Q14671 1186 aaKnown RBP eCLIP16.35■□□□□ 0.21
BRCA2-204ENST00000530893 PTGES3Q15185 160 aaKnown RBP16.35■□□□□ 0.21
BRCA2-204ENST00000530893 CST6Q15828 149 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 TIGD6Q17RP2 521 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 TMEM35AQ53FP2 167 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 ZNF770Q6IQ21 691 aaPredicted RBP16.35■□□□□ 0.21
BRCA2-204ENST00000530893 ZHX1-C8orf76Q96EF9 292 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 TMEM19Q96HH6 336 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 SIRT3Q9NTG7 399 aaPredicted RBP16.35■□□□□ 0.21
BRCA2-204ENST00000530893 WBP1LQ9NX94 342 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 CNOT2Q9NZN8 540 aaKnown RBP16.35■□□□□ 0.21
BRCA2-204ENST00000530893 HCN2Q9UL51 889 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 TMCC3Q9ULS5 477 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 NUMA1Q14980 2115 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 FEZF1A0PJY2 475 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 EFCAB10A6NFE3 127 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 ZAR1LA6NP61 321 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 OR1F1O43749 312 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 HNRNPCP07910 306 aaKnown RBP eCLIP16.35■□□□□ 0.21
BRCA2-204ENST00000530893 C5AR1P21730 350 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 SLC19A1P41440 591 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 RAB28P51157 221 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 CSNK1G2P78368 415 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 ENPP2Q13822 863 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 GANABQ14697 944 aaKnown RBP16.35■□□□□ 0.21
BRCA2-204ENST00000530893 SPDYE7PQ495Y7 208 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 EGFLAMQ63HQ2 1017 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 OR4C11Q6IEV9 310 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 SLC44A2Q8IWA5 706 aaPredicted RBP16.35■□□□□ 0.21
BRCA2-204ENST00000530893 STX19Q8N4C7 294 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 MINDY2Q8NBR6 621 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 DHRS1Q96LJ7 313 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 TIMM29Q9BSF4 260 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 TMEM106CQ9BVX2 250 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 SLIRPQ9GZT3 109 aaKnown RBP16.35■□□□□ 0.21
BRCA2-204ENST00000530893 RMI1Q9H9A7 625 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 PHPT1Q9NRX4 125 aaPredicted RBP16.35■□□□□ 0.21
BRCA2-204ENST00000530893 FTSJ1Q9UET6 329 aa16.35■□□□□ 0.21
BRCA2-204ENST00000530893 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.35■□□□□ 0.21
BRCA2-204ENST00000530893 PLXND1Q9Y4D7 1925 aa16.34■□□□□ 0.21
BRCA2-204ENST00000530893 DSPPQ9NZW4 1301 aa16.34■□□□□ 0.21
BRCA2-204ENST00000530893 HMGN4O00479 90 aa16.34■□□□□ 0.21
BRCA2-204ENST00000530893 MID1O15344 667 aa16.34■□□□□ 0.21
BRCA2-204ENST00000530893 AIREO43918 545 aa16.34■□□□□ 0.21
BRCA2-204ENST00000530893 TMPRSS11DO60235 418 aa16.34■□□□□ 0.21
BRCA2-204ENST00000530893 SH3BP5O60239 455 aa16.34■□□□□ 0.21
BRCA2-204ENST00000530893 SERPINB7O75635 380 aa16.34■□□□□ 0.21
BRCA2-204ENST00000530893 PSMB5P28074 263 aa16.34■□□□□ 0.21
BRCA2-204ENST00000530893 LIPAP38571 399 aa16.34■□□□□ 0.21
BRCA2-204ENST00000530893 CLK1P49759 484 aaKnown RBP16.34■□□□□ 0.21
BRCA2-204ENST00000530893 ARFIP1P53367 373 aa16.34■□□□□ 0.21
BRCA2-204ENST00000530893 CRISP1P54107 249 aa16.34■□□□□ 0.21
BRCA2-204ENST00000530893 SMIM11AP58511 58 aa16.34■□□□□ 0.21
BRCA2-204ENST00000530893 DUSP6Q16828 381 aa16.34■□□□□ 0.21
BRCA2-204ENST00000530893 TBC1D25Q3MII6 688 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms