RNA–Protein interactions for RNA: ENST00000530836.5

VPS28-212, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-212ENST00000530836 TEX10Q9NXF1 929 aaPredicted RBP20.06■□□□□ 0.8
VPS28-212ENST00000530836 TAS2R9Q9NYW1 312 aa20.06■□□□□ 0.8
VPS28-212ENST00000530836 STX18Q9P2W9 335 aaKnown RBP20.06■□□□□ 0.8
VPS28-212ENST00000530836 PLCL2Q9UPR0 1127 aa20.06■□□□□ 0.8
VPS28-212ENST00000530836 SNX13Q9Y5W8 968 aa20.06■□□□□ 0.8
VPS28-212ENST00000530836 A0A1W2PQM1 296 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 CLIC1O00299 241 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 NTN3O00634 580 aaPredicted RBP20.05■□□□□ 0.8
VPS28-212ENST00000530836 PDPK1O15530 556 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 PRAMEF10O60809 474 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 GMNNO75496 209 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 C9P02748 559 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 RPLP0P05388 317 aaKnown RBP20.05■□□□□ 0.8
VPS28-212ENST00000530836 CERS1P27544 350 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 MLLT3P42568 568 aaPredicted RBP20.05■□□□□ 0.8
VPS28-212ENST00000530836 FRKP42685 505 aaPredicted RBP20.05■□□□□ 0.8
VPS28-212ENST00000530836 VSX2P58304 361 aaPredicted RBP20.05■□□□□ 0.8
VPS28-212ENST00000530836 SQSTM1Q13501 440 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 MLC1Q15049 377 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 RCN1Q15293 331 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 LCN8Q6JVE9 175 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 OR5P2Q8WZ92 322 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 S100A14Q9HCY8 104 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 NEUROD4Q9HD90 331 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 SLC6A13Q9NSD5 602 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 SEMA5BQ9P283 1151 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 MAGEL2Q9UJ55 1249 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 PSME2Q9UL46 239 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 AQP12BA6NM10 295 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 PROM1O43490 865 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 KRT36O76013 467 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 GSNP06396 782 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 CD1CP29017 333 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 BUD31P41223 144 aaPredicted RBP20.05■□□□□ 0.8
VPS28-212ENST00000530836 ABHD18Q0P651 414 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 SELPLGQ14242 412 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 NDUFA9Q16795 377 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 MUM1Q2TAK8 710 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 GTDC1Q4AE62 458 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 TCTE1Q5JU00 501 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 SERPINA11Q86U17 422 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 IFNEQ86WN2 208 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 KMT5CQ86Y97 462 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 AQP12AQ8IXF9 295 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 HIPK4Q8NE63 616 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 OR2T12Q8NG77 320 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 POP5Q969H6 163 aaKnown RBP20.05■□□□□ 0.8
VPS28-212ENST00000530836 ZNF583Q96ND8 569 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 SPATA9Q9BWV2 254 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 NPLQ9BXD5 320 aaPredicted RBP20.05■□□□□ 0.8
VPS28-212ENST00000530836 TRIM8Q9BZR9 551 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 LYRM4Q9HD34 91 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 ANGPTL2Q9UKU9 493 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 SPACA6W5XKT8 324 aa20.05■□□□□ 0.8
VPS28-212ENST00000530836 MN1Q10571 1320 aaPredicted RBP20.05■□□□□ 0.8
VPS28-212ENST00000530836 FAM220BPB1ANY3 271 aa20.04■□□□□ 0.8
VPS28-212ENST00000530836 B3GALT4O96024 378 aa20.04■□□□□ 0.8
VPS28-212ENST00000530836 GPX2P18283 190 aa20.04■□□□□ 0.8
VPS28-212ENST00000530836 TLX1P31314 330 aaPredicted RBP20.04■□□□□ 0.8
VPS28-212ENST00000530836 GFERP55789 205 aa20.04■□□□□ 0.8
VPS28-212ENST00000530836 PCBP4P57723 403 aaKnown RBP20.04■□□□□ 0.8
VPS28-212ENST00000530836 HBA1P69905 142 aa20.04■□□□□ 0.8
VPS28-212ENST00000530836 RHDQ02161 417 aa20.04■□□□□ 0.8
VPS28-212ENST00000530836 MPEG1Q2M385 716 aa20.04■□□□□ 0.8
VPS28-212ENST00000530836 AMZ1Q400G9 498 aa20.04■□□□□ 0.8
VPS28-212ENST00000530836 DEFB134Q4QY38 66 aa20.04■□□□□ 0.8
VPS28-212ENST00000530836 GARNL3Q5VVW2 1013 aa20.04■□□□□ 0.8
VPS28-212ENST00000530836 CDCP2Q5VXM1 449 aa20.04■□□□□ 0.8
VPS28-212ENST00000530836 NKAIN2Q5VXU1 208 aa20.04■□□□□ 0.8
VPS28-212ENST00000530836 SPATA24Q86W54 205 aa20.04■□□□□ 0.8
VPS28-212ENST00000530836 OR10A6Q8NH74 314 aa20.04■□□□□ 0.8
VPS28-212ENST00000530836 CIDECQ96AQ7 238 aaPredicted RBP20.04■□□□□ 0.8
VPS28-212ENST00000530836 FAM120BQ96EK7 910 aaKnown RBP20.04■□□□□ 0.8
VPS28-212ENST00000530836 ZNF285Q96NJ3 590 aa20.04■□□□□ 0.8
VPS28-212ENST00000530836 ZMYND15Q9H091 742 aa20.04■□□□□ 0.8
VPS28-212ENST00000530836 RAD21L1Q9H4I0 556 aa20.04■□□□□ 0.8
VPS28-212ENST00000530836 SLC35C2Q9NQQ7 365 aa20.04■□□□□ 0.8
VPS28-212ENST00000530836 SOHLH2Q9NX45 425 aa20.04■□□□□ 0.8
VPS28-212ENST00000530836 FBXW2Q9UKT8 454 aa20.04■□□□□ 0.8
VPS28-212ENST00000530836 ATG4BQ9Y4P1 393 aa20.04■□□□□ 0.8
VPS28-212ENST00000530836 SPTBN2O15020 2390 aa20.04■□□□□ 0.8
VPS28-212ENST00000530836 CROCCQ5TZA2 2017 aa20.03■□□□□ 0.8
VPS28-212ENST00000530836 A0A1W2PR48 441 aa20.03■□□□□ 0.8
VPS28-212ENST00000530836 H0Y3Z8 333 aa20.03■□□□□ 0.8
VPS28-212ENST00000530836 TOX3O15405 576 aaPredicted RBP20.03■□□□□ 0.8
VPS28-212ENST00000530836 C6orf47O95873 294 aa20.03■□□□□ 0.8
VPS28-212ENST00000530836 C8BP07358 591 aa20.03■□□□□ 0.8
VPS28-212ENST00000530836 MANFP55145 182 aaKnown RBP20.03■□□□□ 0.8
VPS28-212ENST00000530836 CLPPQ16740 277 aaPredicted RBP20.03■□□□□ 0.8
VPS28-212ENST00000530836 PRTGQ2VWP7 1150 aa20.03■□□□□ 0.8
VPS28-212ENST00000530836 SLC48A1Q6P1K1 146 aa20.03■□□□□ 0.8
VPS28-212ENST00000530836 PRSS42Q7Z5A4 293 aa20.03■□□□□ 0.8
VPS28-212ENST00000530836 TMPRSS12Q86WS5 348 aa20.03■□□□□ 0.8
VPS28-212ENST00000530836 CALHM3Q86XJ0 350 aa20.03■□□□□ 0.8
VPS28-212ENST00000530836 SAMD14Q8IZD0 417 aaPredicted RBP20.03■□□□□ 0.8
VPS28-212ENST00000530836 MMP21Q8N119 569 aa20.03■□□□□ 0.8
VPS28-212ENST00000530836 ZFP28Q8NHY6 868 aa20.03■□□□□ 0.8
VPS28-212ENST00000530836 ZCCHC10Q8TBK6 192 aa20.03■□□□□ 0.8
VPS28-212ENST00000530836 DUS3LQ96G46 650 aaKnown RBP20.03■□□□□ 0.8
VPS28-212ENST00000530836 RSRC1Q96IZ7 334 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms