RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 MAGEA12P43365 314 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 XCR1P46094 333 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 E2F2Q14209 437 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 SLBPQ14493 270 aaKnown RBP eCLIP7.94□□□□□ -1.14
SSBP3-212ENST00000528930 HERC3Q15034 1050 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 RBBP5Q15291 538 aaKnown RBP7.94□□□□□ -1.14
SSBP3-212ENST00000528930 FAAH2Q6GMR7 532 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 IGFL2Q6UWQ7 119 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 NDUFAF7Q7L592 441 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 VN1R5Q7Z5H4 357 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 TBC1D1Q86TI0 1168 aaPredicted RBP7.94□□□□□ -1.14
SSBP3-212ENST00000528930 TBC1D19Q8N5T2 526 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 TRPV3Q8NET8 790 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 OR5T3Q8NGG3 340 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 RHEBL1Q8TAI7 183 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 PPP4R1Q8TF05 950 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 KCTD4Q8WVF5 259 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 PSMF1Q92530 271 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 ISL2Q96A47 359 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 WDR34Q96EX3 536 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 CAPS2Q9BXY5 557 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 CD244Q9BZW8 370 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 VN1R1Q9GZP7 353 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 NT5DC2Q9H857 520 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 CNOT10Q9H9A5 744 aaKnown RBP7.94□□□□□ -1.14
SSBP3-212ENST00000528930 OLAHQ9NV23 265 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 DNAJC11Q9NVH1 559 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 CD274Q9NZQ7 290 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 HCN3Q9P1Z3 774 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 ZNF490Q9ULM2 529 aaPredicted RBP7.94□□□□□ -1.14
SSBP3-212ENST00000528930 RNF112Q9ULX5 631 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 NFU1Q9UMS0 254 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 GPC6Q9Y625 555 aaPredicted RBP7.94□□□□□ -1.14
SSBP3-212ENST00000528930 A0A087X1B8 175 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 A0A096LPK6 155 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 ZNF860A6NHJ4 632 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 FOXO6A8MYZ6 492 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 UBXN8O00124 270 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 CHST10O43529 356 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 SPRY1O43609 319 aaPredicted RBP7.93□□□□□ -1.14
SSBP3-212ENST00000528930 KLK8O60259 260 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 KERAO60938 352 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 H2AFYO75367 372 aaKnown RBP7.93□□□□□ -1.14
SSBP3-212ENST00000528930 SERPINA6P08185 405 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 CELA2AP08217 269 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 ZNF888P0CJ79 500 aaPredicted RBP7.93□□□□□ -1.14
SSBP3-212ENST00000528930 DNASE1P24855 282 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 GCAP28676 217 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 TYK2P29597 1187 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 CASP2P42575 452 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 AGTR2P50052 363 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 SERPINB8P50452 374 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 RAB8AP61006 207 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 OLR1P78380 273 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 EEF1A2Q05639 463 aaKnown RBP7.93□□□□□ -1.14
SSBP3-212ENST00000528930 RGS1Q08116 209 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 PCDH1Q08174 1060 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 DOC2AQ14183 400 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 UAP1Q16222 522 aaPredicted RBP7.93□□□□□ -1.14
SSBP3-212ENST00000528930 DEFB134Q4QY38 66 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 ADNP2Q6IQ32 1131 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 FAM180AQ6UWF9 173 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 TMIGD1Q6UXZ0 262 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 CAMKMTQ7Z624 323 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 IFT20Q8IY31 132 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.93□□□□□ -1.14
SSBP3-212ENST00000528930 PLD6Q8N2A8 252 aaKnown RBP7.93□□□□□ -1.14
SSBP3-212ENST00000528930 BCORP1Q8N888 145 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 SIMC1Q8NDZ2 872 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 PLPP5Q8NEB5 264 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 DCAKDQ8WVC6 231 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 EXT2Q93063 718 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 PEX11GQ96HA9 241 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 THOC3Q96J01 351 aaKnown RBP7.93□□□□□ -1.14
SSBP3-212ENST00000528930 VPS50Q96JG6 964 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 IMMP1LQ96LU5 166 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 PAFAH2Q99487 392 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 ZNF559Q9BR84 538 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 TXLNGYQ9BZA5 131 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 PITHD1Q9GZP4 211 aaPredicted RBP7.93□□□□□ -1.14
SSBP3-212ENST00000528930 LHPPQ9H008 270 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 ZNF700Q9H0M5 742 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 EHD1Q9H4M9 534 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 ZNF160Q9HCG1 818 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 LANCL2Q9NS86 450 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 DNAJB12Q9NXW2 375 aaKnown RBP7.93□□□□□ -1.14
SSBP3-212ENST00000528930 NUDT4Q9NZJ9 180 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 KCNN3Q9UGI6 736 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.93□□□□□ -1.14
SSBP3-212ENST00000528930 ZNF180Q9UJW8 692 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 PLEKHA6Q9Y2H5 1048 aa7.93□□□□□ -1.14
SSBP3-212ENST00000528930 SVEP1Q4LDE5 3571 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 SCN2AQ99250 2005 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 NSG1A0A0A6YYJ2 146 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 IGHV3-20A0A0C4DH32 117 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 CCDC189A1A4V9 331 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 LRIT2A6NDA9 550 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 SUPT3HB4E1H0 165 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 POC1B-GALNT4F8VUJ3 575 aa7.92□□□□□ -1.14
SSBP3-212ENST00000528930 POLR3GO15318 223 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms