RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 SNX3O60493 162 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 ALOX12BO75342 701 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 CREG1O75629 220 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 TIAF1O95411 115 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 GPR75O95800 540 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 KRT16P08779 473 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 SLC35E2P0CK97 266 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 ZNF28P17035 718 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 NCF2P19878 526 aaPredicted RBP7.47□□□□□ -1.21
SSBP3-211ENST00000528787 MMP11P24347 488 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 ARRB2P32121 409 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 MAGEA8P43361 318 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 KIR3DL1P43629 444 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 ALDH9A1P49189 494 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 STX5Q13190 355 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 MLC1Q15049 377 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 ELAVL1Q15717 326 aaKnown RBP7.47□□□□□ -1.21
SSBP3-211ENST00000528787 NSDHLQ15738 373 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 EXT1Q16394 746 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 SLC48A1Q6P1K1 146 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 SCIMPQ6UWF3 145 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 CAMKMTQ7Z624 323 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 UBE3DQ7Z6J8 389 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 ST13P4Q8IZP2 240 aaPredicted RBP7.47□□□□□ -1.21
SSBP3-211ENST00000528787 LIX1Q8N485 282 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 ENDOVQ8N8Q3 282 aaKnown RBP7.47□□□□□ -1.21
SSBP3-211ENST00000528787 AMER3Q8N944 861 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 PCYOX1LQ8NBM8 494 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 CCDC197Q8NCU1 140 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 OR14A16Q8NHC5 309 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 CDC26Q8NHZ8 85 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 CT55Q8WUE5 264 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 KLHL29Q96CT2 875 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 CMTM5Q96DZ9 223 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 SLC45A3Q96JT2 553 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 PTCHD1Q96NR3 888 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 DGAT2Q96PD7 388 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 CCNL2Q96S94 520 aaPredicted RBP7.47□□□□□ -1.21
SSBP3-211ENST00000528787 LPAR4Q99677 370 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 MAPKAP1Q9BPZ7 522 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 ELAC2Q9BQ52 826 aaKnown RBP7.47□□□□□ -1.21
SSBP3-211ENST00000528787 MACROD1Q9BQ69 325 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 TUBB6Q9BUF5 446 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 TMEM120AQ9BXJ8 343 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 ZNF717Q9BY31 904 aaPredicted RBP7.47□□□□□ -1.21
SSBP3-211ENST00000528787 BHLHE41Q9C0J9 482 aaPredicted RBP7.47□□□□□ -1.21
SSBP3-211ENST00000528787 FAM107BQ9H098 131 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 ACTL8Q9H568 366 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 ZNF395Q9H8N7 513 aaPredicted RBP7.47□□□□□ -1.21
SSBP3-211ENST00000528787 C3orf14Q9HBI5 128 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 HHATLQ9HCP6 504 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 ADAP2Q9NPF8 381 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 SLC35C2Q9NQQ7 365 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 SDR39U1Q9NRG7 319 aaPredicted RBP7.47□□□□□ -1.21
SSBP3-211ENST00000528787 AIG1Q9NVV5 245 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 KCMF1Q9P0J7 381 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 FOXJ2Q9P0K8 574 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 HCN3Q9P1Z3 774 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 TEKT2Q9UIF3 430 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 C3orf18Q9UK00 162 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 CROTQ9UKG9 612 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 UTS2RQ9UKP6 389 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 CORO2BQ9UQ03 480 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 PTRH2Q9Y3E5 179 aaKnown RBP7.47□□□□□ -1.21
SSBP3-211ENST00000528787 POLR3HQ9Y535 204 aaPredicted RBP7.47□□□□□ -1.21
SSBP3-211ENST00000528787 CLCA3PQ9Y6N3 262 aa7.47□□□□□ -1.21
SSBP3-211ENST00000528787 FAM234BA2RU67 622 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 IDSB3KWA1 339 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 E9PBE3 544 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 AGRPO00253 132 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 RTCAO00442 366 aaKnown RBP7.46□□□□□ -1.22
SSBP3-211ENST00000528787 RNASET2O00584 256 aaKnown RBP7.46□□□□□ -1.22
SSBP3-211ENST00000528787 CYR61O00622 381 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 ZNF195O14628 629 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 SCAMP2O15127 329 aaKnown RBP7.46□□□□□ -1.22
SSBP3-211ENST00000528787 PDPK1O15530 556 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 COQ9O75208 318 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 SH3BGRLO75368 114 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 EEDO75530 441 aaKnown RBP7.46□□□□□ -1.22
SSBP3-211ENST00000528787 ETHE1O95571 254 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 AIFM1O95831 613 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 TBX6O95947 436 aaPredicted RBP7.46□□□□□ -1.22
SSBP3-211ENST00000528787 NPPAP01160 153 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 IFNA16P05015 189 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 ATP1B1P05026 303 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 IL3P08700 152 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 FURINP09958 794 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 G6PDP11413 515 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 PORP16435 677 aaPredicted RBP7.46□□□□□ -1.22
SSBP3-211ENST00000528787 SDC1P18827 310 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 TNNI3P19429 210 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 S100A3P33764 101 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 STT3AP46977 705 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 CLDN6P56747 220 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 TMPRSS3P57727 454 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 PRR5P85299 388 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 RUNX2Q13950 521 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 UGT8Q16880 541 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 SLC9B1Q4ZJI4 515 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 COQ5Q5HYK3 327 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms