RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 LRRN4CLQ8ND94 238 aa30.79■■■□□ 2.52
SSSCA1-205ENST00000527920 ANKRD9Q96BM1 317 aaPredicted RBP30.79■■■□□ 2.52
SSSCA1-205ENST00000527920 NSUN5Q96P11 429 aaKnown RBP30.79■■■□□ 2.52
SSSCA1-205ENST00000527920 CDK15Q96Q40 435 aa30.79■■■□□ 2.52
SSSCA1-205ENST00000527920 FRG2BQ96QU4 278 aa30.79■■■□□ 2.52
SSSCA1-205ENST00000527920 SERPINI1Q99574 410 aa30.79■■■□□ 2.52
SSSCA1-205ENST00000527920 RPF2Q9H7B2 306 aaKnown RBP30.79■■■□□ 2.52
SSSCA1-205ENST00000527920 LYARQ9NX58 379 aaKnown RBP30.79■■■□□ 2.52
SSSCA1-205ENST00000527920 A8MT66 165 aa30.78■■■□□ 2.52
SSSCA1-205ENST00000527920 LDB3O75112 727 aa30.78■■■□□ 2.52
SSSCA1-205ENST00000527920 SLC25A12O75746 678 aa30.78■■■□□ 2.52
SSSCA1-205ENST00000527920 ZFAND5O76080 213 aa30.78■■■□□ 2.52
SSSCA1-205ENST00000527920 RNF224P0DH78 156 aa30.78■■■□□ 2.52
SSSCA1-205ENST00000527920 TLX1P31314 330 aaPredicted RBP30.78■■■□□ 2.52
SSSCA1-205ENST00000527920 BSGP35613 385 aa30.78■■■□□ 2.52
SSSCA1-205ENST00000527920 ARL1P40616 181 aaPredicted RBP30.78■■■□□ 2.52
SSSCA1-205ENST00000527920 TNFRSF17Q02223 184 aa30.78■■■□□ 2.52
SSSCA1-205ENST00000527920 MRM1Q6IN84 353 aaKnown RBP30.78■■■□□ 2.52
SSSCA1-205ENST00000527920 SLC25A25Q6KCM7 469 aa30.78■■■□□ 2.52
SSSCA1-205ENST00000527920 ZNF483Q8TF39 744 aaPredicted RBP30.78■■■□□ 2.52
SSSCA1-205ENST00000527920 TANKQ92844 425 aa30.78■■■□□ 2.52
SSSCA1-205ENST00000527920 KLHL1Q9NR64 748 aa30.78■■■□□ 2.52
SSSCA1-205ENST00000527920 OSGIN2Q9Y236 505 aa30.78■■■□□ 2.52
SSSCA1-205ENST00000527920 ICE1Q9Y2F5 2266 aa30.77■■■□□ 2.52
SSSCA1-205ENST00000527920 A0A0A6YYD5 115 aa30.77■■■□□ 2.52
SSSCA1-205ENST00000527920 ETHE1O95571 254 aa30.77■■■□□ 2.52
SSSCA1-205ENST00000527920 OTCP00480 354 aa30.77■■■□□ 2.52
SSSCA1-205ENST00000527920 MST1P26927 711 aa30.77■■■□□ 2.52
SSSCA1-205ENST00000527920 NEK2P51955 445 aa30.77■■■□□ 2.52
SSSCA1-205ENST00000527920 ZNF227Q86WZ6 799 aa30.77■■■□□ 2.52
SSSCA1-205ENST00000527920 MYRIPQ8NFW9 859 aa30.77■■■□□ 2.52
SSSCA1-205ENST00000527920 HES7Q9BYE0 225 aa30.77■■■□□ 2.52
SSSCA1-205ENST00000527920 NME2P1O60361 137 aa30.76■■■□□ 2.51
SSSCA1-205ENST00000527920 TAC1P20366 129 aa30.76■■■□□ 2.51
SSSCA1-205ENST00000527920 NME2P22392 152 aa30.76■■■□□ 2.51
SSSCA1-205ENST00000527920 BUD31P41223 144 aaPredicted RBP30.76■■■□□ 2.51
SSSCA1-205ENST00000527920 HNRNPH2P55795 449 aaKnown RBP30.76■■■□□ 2.51
SSSCA1-205ENST00000527920 NUDT13Q86X67 352 aa30.76■■■□□ 2.51
SSSCA1-205ENST00000527920 FAM98AQ8NCA5 519 aaKnown RBP30.76■■■□□ 2.51
SSSCA1-205ENST00000527920 OR8K3Q8NH51 312 aa30.76■■■□□ 2.51
SSSCA1-205ENST00000527920 TMEM125Q96AQ2 219 aa30.76■■■□□ 2.51
SSSCA1-205ENST00000527920 FRMD6Q96NE9 622 aa30.76■■■□□ 2.51
SSSCA1-205ENST00000527920 SEMA4BQ9NPR2 832 aaPredicted RBP30.76■■■□□ 2.51
SSSCA1-205ENST00000527920 YARS2Q9Y2Z4 477 aaKnown RBP30.76■■■□□ 2.51
SSSCA1-205ENST00000527920 ATG4BQ9Y4P1 393 aa30.76■■■□□ 2.51
SSSCA1-205ENST00000527920 ZGRF1Q86YA3 2104 aa30.76■■■□□ 2.51
SSSCA1-205ENST00000527920 FGF17O60258 216 aa30.75■■■□□ 2.51
SSSCA1-205ENST00000527920 ITGA10O75578 1167 aa30.75■■■□□ 2.51
SSSCA1-205ENST00000527920 MLYCDO95822 493 aa30.75■■■□□ 2.51
SSSCA1-205ENST00000527920 GSTA1P08263 222 aa30.75■■■□□ 2.51
SSSCA1-205ENST00000527920 COX7A2P14406 83 aa30.75■■■□□ 2.51
SSSCA1-205ENST00000527920 TNFRSF8P28908 595 aa30.75■■■□□ 2.51
SSSCA1-205ENST00000527920 STT3AP46977 705 aa30.75■■■□□ 2.51
SSSCA1-205ENST00000527920 ST13P50502 369 aaKnown RBP30.75■■■□□ 2.51
SSSCA1-205ENST00000527920 HERVK_113P63132 956 aa30.75■■■□□ 2.51
SSSCA1-205ENST00000527920 PMP22Q01453 160 aa30.75■■■□□ 2.51
SSSCA1-205ENST00000527920 HSDL2Q6YN16 418 aa30.75■■■□□ 2.51
SSSCA1-205ENST00000527920 GALNTL5Q7Z4T8 443 aa30.75■■■□□ 2.51
SSSCA1-205ENST00000527920 MILR1Q7Z6M3 343 aa30.75■■■□□ 2.51
SSSCA1-205ENST00000527920 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP30.75■■■□□ 2.51
SSSCA1-205ENST00000527920 ERVK-6Q9BXR3 956 aa30.75■■■□□ 2.51
SSSCA1-205ENST00000527920 TMEM216Q9P0N5 145 aa30.75■■■□□ 2.51
SSSCA1-205ENST00000527920 SEC14L3Q9UDX4 400 aa30.75■■■□□ 2.51
SSSCA1-205ENST00000527920 ASB4Q9Y574 426 aa30.75■■■□□ 2.51
SSSCA1-205ENST00000527920 C17orf105B2RV13 164 aa30.74■■■□□ 2.51
SSSCA1-205ENST00000527920 PROM1O43490 865 aa30.74■■■□□ 2.51
SSSCA1-205ENST00000527920 EEDO75530 441 aaKnown RBP30.74■■■□□ 2.51
SSSCA1-205ENST00000527920 IFT88Q13099 833 aa30.74■■■□□ 2.51
SSSCA1-205ENST00000527920 ZNF800Q2TB10 664 aaPredicted RBP eCLIP30.74■■■□□ 2.51
SSSCA1-205ENST00000527920 TTC19Q6DKK2 380 aaPredicted RBP30.74■■■□□ 2.51
SSSCA1-205ENST00000527920 GFRALQ6UXV0 394 aa30.74■■■□□ 2.51
SSSCA1-205ENST00000527920 GSPT2Q8IYD1 628 aaKnown RBP30.74■■■□□ 2.51
SSSCA1-205ENST00000527920 OR4F6Q8NGB9 312 aa30.74■■■□□ 2.51
SSSCA1-205ENST00000527920 THAP3Q8WTV1 239 aaPredicted RBP30.74■■■□□ 2.51
SSSCA1-205ENST00000527920 MZB1Q8WU39 189 aa30.74■■■□□ 2.51
SSSCA1-205ENST00000527920 PPCSQ9HAB8 311 aa30.74■■■□□ 2.51
SSSCA1-205ENST00000527920 ADAM29Q9UKF5 820 aa30.74■■■□□ 2.51
SSSCA1-205ENST00000527920 TMEM200CA6NKL6 621 aa30.73■■■□□ 2.51
SSSCA1-205ENST00000527920 TMPRSS11DO60235 418 aa30.73■■■□□ 2.51
SSSCA1-205ENST00000527920 FAM58BPP0C7Q3 252 aa30.73■■■□□ 2.51
SSSCA1-205ENST00000527920 TNNI3P19429 210 aa30.73■■■□□ 2.51
SSSCA1-205ENST00000527920 KCNK10P57789 538 aa30.73■■■□□ 2.51
SSSCA1-205ENST00000527920 CYP20A1Q6UW02 462 aa30.73■■■□□ 2.51
SSSCA1-205ENST00000527920 GPALPP1Q8IXQ4 340 aa30.73■■■□□ 2.51
SSSCA1-205ENST00000527920 TMEM156Q8N614 296 aa30.73■■■□□ 2.51
SSSCA1-205ENST00000527920 SLC2A12Q8TD20 617 aa30.73■■■□□ 2.51
SSSCA1-205ENST00000527920 OR8D2Q9GZM6 311 aa30.73■■■□□ 2.51
SSSCA1-205ENST00000527920 ELOVL6Q9H5J4 265 aa30.73■■■□□ 2.51
SSSCA1-205ENST00000527920 MYOTQ9UBF9 498 aa30.73■■■□□ 2.51
SSSCA1-205ENST00000527920 PLEKHB1Q9UF11 243 aaPredicted RBP30.73■■■□□ 2.51
SSSCA1-205ENST00000527920 KLF13Q9Y2Y9 288 aaPredicted RBP30.73■■■□□ 2.51
SSSCA1-205ENST00000527920 A0A1B0GUH1 482 aa30.72■■■□□ 2.51
SSSCA1-205ENST00000527920 PRKNO60260 465 aaPredicted RBP30.72■■■□□ 2.51
SSSCA1-205ENST00000527920 UNC5CO95185 931 aa30.72■■■□□ 2.51
SSSCA1-205ENST00000527920 NR2F6P10588 404 aa30.72■■■□□ 2.51
SSSCA1-205ENST00000527920 SSR4P51571 173 aa30.72■■■□□ 2.51
SSSCA1-205ENST00000527920 PER3P56645 1201 aa30.72■■■□□ 2.51
SSSCA1-205ENST00000527920 PLIN5Q00G26 463 aa30.72■■■□□ 2.51
SSSCA1-205ENST00000527920 ID2Q02363 134 aa30.72■■■□□ 2.51
SSSCA1-205ENST00000527920 FOLH1Q04609 750 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms