RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 SPRP35270 261 aaPredicted RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 CAPGP40121 348 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 CEACAM6P40199 344 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 RFC3P40938 356 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 ETV6P41212 452 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 NSFP46459 744 aaKnown RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 QARSP47897 775 aaKnown RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 PIK3CGP48736 1102 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 ANXA11P50995 505 aaKnown RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 CLCNKAP51800 687 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 PKNOX1P55347 436 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 KIAA1024LP59773 190 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 ERVK-25P63136 954 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 GTF2BQ00403 316 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 HNF4GQ14541 408 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 IRF4Q15306 451 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 TMED2Q15363 201 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 SEC23BQ15437 767 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 TOMM34Q15785 309 aaPredicted RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 CHRNA6Q15825 494 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 HLFQ16534 295 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 CALCRLQ16602 461 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 CTF1Q16619 201 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 CYP1B1Q16678 543 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 UBE2SQ16763 222 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 HFEQ30201 348 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 UGT3A2Q3SY77 523 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 CDNFQ49AH0 187 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 FLYWCH1Q4VC44 716 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 ZNF805Q5CZA5 627 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 XKR4Q5GH76 650 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 SEL1L2Q5TEA6 688 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 MLIPQ5VWP3 458 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 RRAGBQ5VZM2 374 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 SEL1L3Q68CR1 1132 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 LAMTOR1Q6IAA8 161 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 RPL13AP3Q6NVV1 102 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 TEX261Q6UWH6 196 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 MEX3BQ6ZN04 569 aaKnown RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 PGAP1Q75T13 922 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 ARCQ7LC44 396 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 PIWIL3Q7Z3Z3 882 aaKnown RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 TRMT11Q7Z4G4 463 aaKnown RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 KDELC2Q7Z4H8 507 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 GALNTL5Q7Z4T8 443 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 FAM131BQ86XD5 332 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 MCOLN2Q8IZK6 566 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 ZNF786Q8N393 782 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 SFRP1Q8N474 314 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 STX19Q8N4C7 294 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 NANOGP1Q8N7R0 232 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 ZNF781Q8N8C0 355 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 GDPD1Q8N9F7 314 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 GMCL1P1Q8NEA9 526 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 AGBL3Q8NEM8 1001 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 BPIFB6Q8NFQ5 453 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 OR8J2Q8NGG1 315 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 UBA3Q8TBC4 463 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 DYNC2LI1Q8TCX1 351 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 METTL21AQ8WXB1 218 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 NR4A3Q92570 626 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 TNFRSF14Q92956 283 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 TOP1MTQ969P6 601 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 R3HDM4Q96D70 268 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 OTUB2Q96DC9 234 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 MTERF3Q96E29 417 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 TCEAL4Q96EI5 215 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 WBP1Q96G27 269 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 C14orf144Q96I85 54 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 SERAC1Q96JX3 654 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 HYLS1Q96M11 299 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 PPM1MQ96MI6 270 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 TXN2Q99757 166 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 TREX2Q9BQ50 279 aaPredicted RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 ZNF559Q9BR84 538 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 TUBGCP2Q9BSJ2 902 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 MTG1Q9BT17 334 aaPredicted RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 SF3B5Q9BWJ5 86 aaKnown RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 STRA6Q9BX79 667 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 ERVK-6Q9BXR3 956 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 REG4Q9BYZ8 158 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 TRIM31Q9BZY9 425 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 CCDC8Q9H0W5 538 aaPredicted RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 MIXL1Q9H2W2 232 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 FAM96AQ9H5X1 160 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 COQ10BQ9H8M1 238 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 COPS7BQ9H9Q2 264 aaPredicted RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 ZNF334Q9HCZ1 680 aaPredicted RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 RANGRFQ9HD47 186 aaPredicted RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 ECHDC1Q9NTX5 307 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 TMEM140Q9NV12 185 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 LYARQ9NX58 379 aaKnown RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 DUS2Q9NX74 493 aaKnown RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 TMEM260Q9NX78 707 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 ELOVL5Q9NYP7 299 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 NINJ2Q9NZG7 142 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 MPP6Q9NZW5 540 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 ARMCX1Q9P291 453 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 ERVK-18Q9QC07 812 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 SLCO3A1Q9UIG8 710 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms