RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 ASIC5Q9NY37 505 aa3.64□□□□□ -1.83
C11orf54-204ENST00000527003 SPHK1Q9NYA1 384 aa3.64□□□□□ -1.83
C11orf54-204ENST00000527003 VPS29Q9UBQ0 182 aa3.64□□□□□ -1.83
C11orf54-204ENST00000527003 MARCOQ9UEW3 520 aaPredicted RBP3.64□□□□□ -1.83
C11orf54-204ENST00000527003 CIDEBQ9UHD4 219 aa3.64□□□□□ -1.83
C11orf54-204ENST00000527003 ZNF225Q9UK10 706 aa3.64□□□□□ -1.83
C11orf54-204ENST00000527003 ADAM29Q9UKF5 820 aa3.64□□□□□ -1.83
C11orf54-204ENST00000527003 CROTQ9UKG9 612 aa3.64□□□□□ -1.83
C11orf54-204ENST00000527003 ZNF490Q9ULM2 529 aaPredicted RBP3.64□□□□□ -1.83
C11orf54-204ENST00000527003 PLCL2Q9UPR0 1127 aa3.64□□□□□ -1.83
C11orf54-204ENST00000527003 EIF3LQ9Y262 564 aaKnown RBP3.64□□□□□ -1.83
C11orf54-204ENST00000527003 BTRCQ9Y297 605 aa3.64□□□□□ -1.83
C11orf54-204ENST00000527003 AP1M2Q9Y6Q5 423 aa3.64□□□□□ -1.83
C11orf54-204ENST00000527003 PIKFYVEQ9Y2I7 2098 aa3.64□□□□□ -1.83
C11orf54-204ENST00000527003 MN1Q10571 1320 aaPredicted RBP3.64□□□□□ -1.83
C11orf54-204ENST00000527003 ZNF318Q5VUA4 2279 aa3.64□□□□□ -1.83
C11orf54-204ENST00000527003 PLXNB3Q9ULL4 1909 aa3.64□□□□□ -1.83
C11orf54-204ENST00000527003 LRRK1Q38SD2 2015 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 TRBV23-1A0A0A0MS06 115 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 IGKV1-8A0A0C4DH67 115 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 LY6G6EA0A0G2JKS1 128 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 PRAMEF33A0A0G2JMD5 474 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 ARHGAP10A1A4S6 786 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 LRIT2A6NDA9 550 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 SYNDIG1LA6NDD5 238 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 SLC9B1P1A6NJY1 282 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 C4orf47A7E2U8 309 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 EBAG9O00559 213 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 NTN3O00634 580 aaPredicted RBP3.63□□□□□ -1.83
C11orf54-204ENST00000527003 SDHDO14521 159 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 PIP5K1BO14986 540 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 LSM1O15116 133 aaKnown RBP3.63□□□□□ -1.83
C11orf54-204ENST00000527003 GPR42O15529 346 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 PRAMEF4O60810 478 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 HNRNPCL1O60812 293 aaKnown RBP3.63□□□□□ -1.83
C11orf54-204ENST00000527003 CBFA2T3O75081 653 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 SEC22BO75396 215 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 RASSF9O75901 435 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 ATP5HO75947 161 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 PDYNP01213 254 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 RPLP0P05388 317 aaKnown RBP3.63□□□□□ -1.83
C11orf54-204ENST00000527003 HBQ1P09105 142 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 LINC00032P0C843 101 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 PRR35P0CG20 571 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 PRPS2P11908 318 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 PCNAP12004 261 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 TYRP1P17643 537 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 NELFEP18615 380 aaKnown RBP3.63□□□□□ -1.83
C11orf54-204ENST00000527003 CD22P20273 847 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 MAGP20916 626 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 CSRP1P21291 193 aaKnown RBP3.63□□□□□ -1.83
C11orf54-204ENST00000527003 EPHA3P29320 983 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 SERPINB3P29508 390 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 PEBP1P30086 187 aaKnown RBP3.63□□□□□ -1.83
C11orf54-204ENST00000527003 CCR10P46092 362 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 ASMTP46597 345 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 ACADVLP49748 655 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 NEK2P51955 445 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 RAP1GDS1P52306 607 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 CLNS1AP54105 237 aaKnown RBP3.63□□□□□ -1.83
C11orf54-204ENST00000527003 ARSFP54793 590 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 FOXA1P55317 472 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 C21orf58P58505 322 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 STX1BP61266 288 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 TRA2BP62995 288 aaKnown RBP3.63□□□□□ -1.83
C11orf54-204ENST00000527003 ACSM2AQ08AH3 577 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 LRRC74AQ0VAA2 488 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 EIF3IQ13347 325 aaKnown RBP3.63□□□□□ -1.83
C11orf54-204ENST00000527003 FAM53BQ14153 422 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 SPIDRQ14159 915 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 SQLEQ14534 574 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 IL11RAQ14626 422 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 GRM7Q14831 915 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 KRT72Q14CN4 511 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 ABRAXAS2Q15018 415 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 HERC3Q15034 1050 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 SF3A2Q15428 464 aaKnown RBP3.63□□□□□ -1.83
C11orf54-204ENST00000527003 MAPRE2Q15555 327 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 ZIC1Q15915 447 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 PDCD2Q16342 344 aaPredicted RBP3.63□□□□□ -1.83
C11orf54-204ENST00000527003 AP5B1Q2VPB7 878 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 FAM214AQ32MH5 1076 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 ADPRMQ3LIE5 342 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 LSM12Q3MHD2 195 aaKnown RBP3.63□□□□□ -1.83
C11orf54-204ENST00000527003 AMZ1Q400G9 498 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 SGO1Q5FBB7 561 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 C6orf136Q5SQH8 315 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 CATSPEREQ5SY80 951 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 DEPDC1Q5TB30 811 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 STPG1Q5TH74 334 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 PRAMEF9Q5VWM5 478 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 KHDRBS2Q5VWX1 349 aaKnown RBP3.63□□□□□ -1.83
C11orf54-204ENST00000527003 FAM91A1Q658Y4 838 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 ACSM2BQ68CK6 577 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 NXNQ6DKJ4 435 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 TCEAL6Q6IPX3 200 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 FBXO42Q6P3S6 717 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 GUSBP11Q6P575 273 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 TLDC1Q6P9B6 456 aa3.63□□□□□ -1.83
C11orf54-204ENST00000527003 TRIM40Q6P9F5 258 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms