RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 DIP2CQ9Y2E4 1556 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 CEP170BQ9Y4F5 1589 aaPredicted RBP4.19□□□□□ -1.74
CD44-213ENST00000525209 SHANK2Q9UPX8 1470 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 LOC105371242A0A075B767 164 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 GSTTP1A0A1W2PQM5 241 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 RNF222A6NCQ9 220 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 TMEM202A6NGA9 273 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 WASHC1A8K0Z3 465 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 GOLGA8MH3BSY2 632 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 M0QZ24 198 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 NBR2O15453 112 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 ZSCAN12O43309 604 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 TIMM8AO60220 97 aaPredicted RBP4.19□□□□□ -1.74
CD44-213ENST00000525209 PDE5AO76074 875 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 OR2F2O95006 317 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 TSPAN12O95859 305 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 PGK1P00558 417 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 PLA2G1BP04054 148 aaKnown RBP4.19□□□□□ -1.74
CD44-213ENST00000525209 ERCC1P07992 297 aaPredicted RBP4.19□□□□□ -1.74
CD44-213ENST00000525209 SP9P0CG40 484 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 FGF5P12034 268 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 EZRP15311 586 aaKnown RBP4.19□□□□□ -1.74
CD44-213ENST00000525209 NQO2P16083 231 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 GSTM3P21266 225 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 BMP5P22003 454 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 FCARP24071 287 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 OXTRP30559 389 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 HOXA9P31269 272 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 CCT3P49368 545 aaKnown RBP4.19□□□□□ -1.74
CD44-213ENST00000525209 GDI2P50395 445 aaKnown RBP4.19□□□□□ -1.74
CD44-213ENST00000525209 TNFSF10P50591 281 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 TPMTP51580 245 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 CYP2J2P51589 502 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 THOP1P52888 689 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 IST1P53990 364 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 RPS7P62081 194 aaKnown RBP4.19□□□□□ -1.74
CD44-213ENST00000525209 HERV-K104P63124 156 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 CALCOCO2Q13137 446 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 KEAP1Q14145 624 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 PIGHQ14442 188 aaPredicted RBP4.19□□□□□ -1.74
CD44-213ENST00000525209 CASP8Q14790 479 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 EXT1Q16394 746 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 CAMK4Q16566 473 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 TIGD5Q53EQ6 642 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 C6orf226Q5I0X4 101 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 NDUFAF5Q5TEU4 345 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 METRNLQ641Q3 311 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 SIGIRRQ6IA17 410 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 CES5AQ6NT32 575 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 TMEM107Q6UX40 140 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 WASH2PQ6VEQ5 465 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 CENPUQ71F23 418 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 RBM45Q8IUH3 476 aaKnown RBP4.19□□□□□ -1.74
CD44-213ENST00000525209 TDHQ8IZJ6 230 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 SELENOHQ8IZQ5 122 aaKnown RBP4.19□□□□□ -1.74
CD44-213ENST00000525209 BHLHE22Q8NFJ8 381 aaPredicted RBP4.19□□□□□ -1.74
CD44-213ENST00000525209 OR4A15Q8NGL6 344 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 OR14K1Q8NGZ2 314 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 RHEBL1Q8TAI7 183 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 FEZF2Q8TBJ5 459 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 SCARB1Q8WTV0 552 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 UBTD2Q8WUN7 234 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 ST8SIA1Q92185 356 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 SLC38A4Q969I6 547 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 R3HDM4Q96D70 268 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 MARK4Q96L34 752 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 FAM20AQ96MK3 541 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 TECTBQ96PL2 329 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 ZNF347Q96SE7 839 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 KRT12Q99456 494 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 WRAP53Q9BUR4 548 aaKnown RBP4.19□□□□□ -1.74
CD44-213ENST00000525209 RBM24Q9BX46 236 aaKnown RBP4.19□□□□□ -1.74
CD44-213ENST00000525209 ANGPTL4Q9BY76 406 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 POTEKPQ9BYX7 375 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 UPF3BQ9BZI7 483 aaKnown RBP4.19□□□□□ -1.74
CD44-213ENST00000525209 RAB1BQ9H0U4 201 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 ELOVL6Q9H5J4 265 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 SMYD3Q9H7B4 428 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 MTHFD2LQ9H903 347 aaPredicted RBP4.19□□□□□ -1.74
CD44-213ENST00000525209 NTN4Q9HB63 628 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 LYRM4Q9HD34 91 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 RAB18Q9NP72 206 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.19□□□□□ -1.74
CD44-213ENST00000525209 SMOXQ9NWM0 555 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 PSORS1C1Q9UIG5 152 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 FZD4Q9ULV1 537 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 RNF115Q9Y4L5 304 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 SALL1Q9NSC2 1324 aa4.19□□□□□ -1.74
CD44-213ENST00000525209 TNRQ92752 1358 aa4.18□□□□□ -1.74
CD44-213ENST00000525209 CPS1P31327 1500 aa4.18□□□□□ -1.74
CD44-213ENST00000525209 FAM135AQ9P2D6 1515 aa4.18□□□□□ -1.74
CD44-213ENST00000525209 C1orf232A0A0U1RR37 186 aa4.18□□□□□ -1.74
CD44-213ENST00000525209 LOC390937A0A1W2PQ73 354 aa4.18□□□□□ -1.74
CD44-213ENST00000525209 A0A1W2PRB8 838 aa4.18□□□□□ -1.74
CD44-213ENST00000525209 DPPA5A6NC42 116 aa4.18□□□□□ -1.74
CD44-213ENST00000525209 OR5K4A6NMS3 321 aa4.18□□□□□ -1.74
CD44-213ENST00000525209 E7ENQ6 273 aa4.18□□□□□ -1.74
CD44-213ENST00000525209 TEX46H3BTG2 121 aa4.18□□□□□ -1.74
CD44-213ENST00000525209 GOLGA8RI6L899 631 aa4.18□□□□□ -1.74
CD44-213ENST00000525209 CHEK1O14757 476 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms