RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 NAT9Q9BTE0 207 aa20.98■□□□□ 0.95
PVT1-218ENST00000523328 SH2D2AQ9NP31 389 aa20.98■□□□□ 0.95
PVT1-218ENST00000523328 PPANQ9NQ55 473 aaKnown RBP20.98■□□□□ 0.95
PVT1-218ENST00000523328 OARD1Q9Y530 152 aa20.98■□□□□ 0.95
PVT1-218ENST00000523328 C17orf105B2RV13 164 aa20.97■□□□□ 0.95
PVT1-218ENST00000523328 UQCRC1P31930 480 aa20.97■□□□□ 0.95
PVT1-218ENST00000523328 STX4Q12846 297 aa20.97■□□□□ 0.95
PVT1-218ENST00000523328 MPEG1Q2M385 716 aa20.97■□□□□ 0.95
PVT1-218ENST00000523328 FLYWCH1Q4VC44 716 aa20.97■□□□□ 0.95
PVT1-218ENST00000523328 ADNP2Q6IQ32 1131 aa20.97■□□□□ 0.95
PVT1-218ENST00000523328 TRMT10BQ6PF06 316 aaKnown RBP20.97■□□□□ 0.95
PVT1-218ENST00000523328 KRT78Q8N1N4 520 aa20.97■□□□□ 0.95
PVT1-218ENST00000523328 GOT1L1Q8NHS2 421 aaPredicted RBP20.97■□□□□ 0.95
PVT1-218ENST00000523328 ZNF721Q8TF20 911 aa20.97■□□□□ 0.95
PVT1-218ENST00000523328 RHBDF1Q96CC6 855 aa20.97■□□□□ 0.95
PVT1-218ENST00000523328 EXO5Q9H790 373 aa20.97■□□□□ 0.95
PVT1-218ENST00000523328 ZNF703Q9H7S9 590 aaPredicted RBP20.97■□□□□ 0.95
PVT1-218ENST00000523328 DMRT3Q9NQL9 472 aa20.97■□□□□ 0.95
PVT1-218ENST00000523328 PRDM7Q9NQW5 492 aa20.97■□□□□ 0.95
PVT1-218ENST00000523328 CBLCQ9ULV8 474 aa20.97■□□□□ 0.95
PVT1-218ENST00000523328 EDARQ9UNE0 448 aa20.97■□□□□ 0.95
PVT1-218ENST00000523328 PCDHGB3Q9Y5G1 929 aa20.97■□□□□ 0.95
PVT1-218ENST00000523328 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.97■□□□□ 0.95
PVT1-218ENST00000523328 ANKDD1BA6NHY2 528 aa20.96■□□□□ 0.95
PVT1-218ENST00000523328 LDB3O75112 727 aa20.96■□□□□ 0.95
PVT1-218ENST00000523328 ETHE1O95571 254 aa20.96■□□□□ 0.95
PVT1-218ENST00000523328 RFPL3SP0C7P2 107 aa20.96■□□□□ 0.95
PVT1-218ENST00000523328 DGKQP52824 942 aa20.96■□□□□ 0.95
PVT1-218ENST00000523328 RCN2Q14257 317 aa20.96■□□□□ 0.95
PVT1-218ENST00000523328 ZNF791Q3KP31 576 aaPredicted RBP20.96■□□□□ 0.95
PVT1-218ENST00000523328 PIGGQ5H8A4 983 aa20.96■□□□□ 0.95
PVT1-218ENST00000523328 CAMKMTQ7Z624 323 aa20.96■□□□□ 0.95
PVT1-218ENST00000523328 ULK2Q8IYT8 1036 aa20.96■□□□□ 0.95
PVT1-218ENST00000523328 NAXEQ8NCW5 288 aa20.96■□□□□ 0.95
PVT1-218ENST00000523328 FAM222BQ8WU58 562 aa20.96■□□□□ 0.95
PVT1-218ENST00000523328 PITHD1Q9GZP4 211 aaPredicted RBP20.96■□□□□ 0.95
PVT1-218ENST00000523328 TRMT1Q9NXH9 659 aaKnown RBP20.96■□□□□ 0.95
PVT1-218ENST00000523328 HSPB2A8KAH6 182 aa20.95■□□□□ 0.94
PVT1-218ENST00000523328 PRAMEF4O60810 478 aa20.95■□□□□ 0.94
PVT1-218ENST00000523328 TNNI3P19429 210 aa20.95■□□□□ 0.94
PVT1-218ENST00000523328 HPDP32754 393 aaPredicted RBP20.95■□□□□ 0.94
PVT1-218ENST00000523328 ASPHQ12797 758 aa20.95■□□□□ 0.94
PVT1-218ENST00000523328 SERTAD2Q14140 314 aa20.95■□□□□ 0.94
PVT1-218ENST00000523328 ZNF460Q14592 562 aa20.95■□□□□ 0.94
PVT1-218ENST00000523328 HSPB2Q16082 182 aa20.95■□□□□ 0.94
PVT1-218ENST00000523328 PRAMEF9Q5VWM5 478 aa20.95■□□□□ 0.94
PVT1-218ENST00000523328 SLC22A10Q63ZE4 541 aa20.95■□□□□ 0.94
PVT1-218ENST00000523328 LYPD8Q6UX82 237 aa20.95■□□□□ 0.94
PVT1-218ENST00000523328 PAMR1Q6UXH9 720 aa20.95■□□□□ 0.94
PVT1-218ENST00000523328 NKAPQ8N5F7 415 aaKnown RBP20.95■□□□□ 0.94
PVT1-218ENST00000523328 PAQR8Q8TEZ7 354 aa20.95■□□□□ 0.94
PVT1-218ENST00000523328 COPS7BQ9H9Q2 264 aaPredicted RBP20.95■□□□□ 0.94
PVT1-218ENST00000523328 PROK2Q9HC23 129 aa20.95■□□□□ 0.94
PVT1-218ENST00000523328 ZNF490Q9ULM2 529 aaPredicted RBP20.95■□□□□ 0.94
PVT1-218ENST00000523328 NSD1Q96L73 2696 aaPredicted RBP20.95■□□□□ 0.94
PVT1-218ENST00000523328 DNALI1O14645 258 aaPredicted RBP20.94■□□□□ 0.94
PVT1-218ENST00000523328 FNTAP49354 379 aa20.94■□□□□ 0.94
PVT1-218ENST00000523328 ASCL1P50553 236 aa20.94■□□□□ 0.94
PVT1-218ENST00000523328 ID2Q02363 134 aa20.94■□□□□ 0.94
PVT1-218ENST00000523328 DAZAP2Q15038 168 aaPredicted RBP20.94■□□□□ 0.94
PVT1-218ENST00000523328 TSNQ15631 228 aaKnown RBP20.94■□□□□ 0.94
PVT1-218ENST00000523328 FBXL19-AS1Q494R0 122 aa20.94■□□□□ 0.94
PVT1-218ENST00000523328 ZNF793Q6ZN11 406 aa20.94■□□□□ 0.94
PVT1-218ENST00000523328 LRRC25Q8N386 305 aaPredicted RBP20.94■□□□□ 0.94
PVT1-218ENST00000523328 FBXW8Q8N3Y1 598 aa20.94■□□□□ 0.94
PVT1-218ENST00000523328 NEIL3Q8TAT5 605 aa20.94■□□□□ 0.94
PVT1-218ENST00000523328 NUBPLQ8TB37 319 aa20.94■□□□□ 0.94
PVT1-218ENST00000523328 GRK7Q8WTQ7 553 aa20.94■□□□□ 0.94
PVT1-218ENST00000523328 ANKRD49Q8WVL7 239 aa20.94■□□□□ 0.94
PVT1-218ENST00000523328 KIAA1191Q96A73 305 aa20.94■□□□□ 0.94
PVT1-218ENST00000523328 ANKRD9Q96BM1 317 aaPredicted RBP20.94■□□□□ 0.94
PVT1-218ENST00000523328 PBKQ96KB5 322 aa20.94■□□□□ 0.94
PVT1-218ENST00000523328 MAPKAP1Q9BPZ7 522 aa20.94■□□□□ 0.94
PVT1-218ENST00000523328 WDR83Q9BRX9 315 aaKnown RBP20.94■□□□□ 0.94
PVT1-218ENST00000523328 LYRM4Q9HD34 91 aa20.94■□□□□ 0.94
PVT1-218ENST00000523328 ACKR4Q9NPB9 350 aa20.94■□□□□ 0.94
PVT1-218ENST00000523328 GPRC5BQ9NZH0 403 aa20.94■□□□□ 0.94
PVT1-218ENST00000523328 PSAT1Q9Y617 370 aa20.94■□□□□ 0.94
PVT1-218ENST00000523328 LRRC3CA6NJW4 275 aa20.93■□□□□ 0.94
PVT1-218ENST00000523328 BMP5P22003 454 aa20.93■□□□□ 0.94
PVT1-218ENST00000523328 HP1BP3Q5SSJ5 553 aaPredicted RBP20.93■□□□□ 0.94
PVT1-218ENST00000523328 POMZP3Q6PJE2 187 aa20.93■□□□□ 0.94
PVT1-218ENST00000523328 UBE3DQ7Z6J8 389 aa20.93■□□□□ 0.94
PVT1-218ENST00000523328 ADAMTSL2Q86TH1 951 aa20.93■□□□□ 0.94
PVT1-218ENST00000523328 C9orf40Q8IXQ3 194 aa20.93■□□□□ 0.94
PVT1-218ENST00000523328 WFDC11Q8NEX6 87 aa20.93■□□□□ 0.94
PVT1-218ENST00000523328 RNASE6Q93091 150 aaKnown RBP20.93■□□□□ 0.94
PVT1-218ENST00000523328 RUNDC3BQ96NL0 473 aa20.93■□□□□ 0.94
PVT1-218ENST00000523328 F2RL3Q96RI0 385 aa20.93■□□□□ 0.94
PVT1-218ENST00000523328 SLC6A15Q9H2J7 730 aa20.93■□□□□ 0.94
PVT1-218ENST00000523328 EHD1Q9H4M9 534 aa20.93■□□□□ 0.94
PVT1-218ENST00000523328 ZFP64Q9NPA5 681 aa20.93■□□□□ 0.94
PVT1-218ENST00000523328 COPS7AQ9UBW8 275 aa20.93■□□□□ 0.94
PVT1-218ENST00000523328 KIAA1549Q9HCM3 1950 aa20.93■□□□□ 0.94
PVT1-218ENST00000523328 A0A1B0GTL3 188 aa20.92■□□□□ 0.94
PVT1-218ENST00000523328 GOLGA6L6A8MZA4 724 aa20.92■□□□□ 0.94
PVT1-218ENST00000523328 KDM4EB2RXH2 506 aaPredicted RBP20.92■□□□□ 0.94
PVT1-218ENST00000523328 DVL2O14641 736 aa20.92■□□□□ 0.94
PVT1-218ENST00000523328 ATE1O95260 518 aa20.92■□□□□ 0.94
PVT1-218ENST00000523328 RAF1P04049 648 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms