RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 ZNF550Q7Z398 422 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 CLNKQ7Z7G1 428 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 ADGRE4PQ86SQ3 457 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 ZNF611Q8N823 705 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 OR10G3Q8NGC4 313 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 OR8K1Q8NGG5 319 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 OR14A16Q8NHC5 309 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 SLC22A8Q8TCC7 542 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 SLC2A12Q8TD20 617 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 IQCDQ96DY2 449 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 ZNF597Q96LX8 424 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 KCNK17Q96T54 332 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 TUBA1CQ9BQE3 449 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 DOHHQ9BU89 302 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 AICDAQ9GZX7 198 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 SPNS1Q9H2V7 528 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 SLCO5A1Q9H2Y9 848 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 UBQLN3Q9H347 655 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 CNOT11Q9UKZ1 510 aaKnown RBP12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 IKBKGQ9Y6K9 419 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 MYOCOSA0A1B0GUC4 107 aa12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 URADA6NGE7 173 aa12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 E5RI56 91 aa12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 OVOL3O00110 214 aa12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 AKR1B10O60218 316 aa12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 SERPINC1P01008 464 aa12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 ARNTP27540 789 aa12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 CFPP27918 469 aa12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 NAE1Q13564 534 aa12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 TTLL9Q3SXZ7 439 aa12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 AGTRAPQ6RW13 159 aa12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 ZNF704Q6ZNC4 412 aaPredicted RBP12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 MBOAT1Q6ZNC8 495 aa12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 CAND1Q86VP6 1230 aaKnown RBP12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 ZNF595Q8IYB9 648 aa12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 OTUD6BQ8N6M0 293 aa12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 FAM13CQ8NE31 585 aa12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 ABTB1Q969K4 478 aaPredicted RBP12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 ALKBH8Q96BT7 664 aaKnown RBP12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 ZC3HAV1LQ96H79 300 aaKnown RBP12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 FAM111AQ96PZ2 611 aa12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 ACBD3Q9H3P7 528 aa12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 VTI1BQ9UEU0 232 aa12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 PCDHA13Q9Y5I0 950 aa12.63□□□□□ -0.39
NKX3-1-202ENST00000523261 FREM1Q5H8C1 2179 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 SYNDIG1LA6NDD5 238 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 LRRC14BA6NHZ5 514 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 HS3ST1O14792 307 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 PLAUP00749 431 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 CCND1P24385 295 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 AHRP35869 848 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 UGT2B10P36537 528 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 NAGLUP54802 743 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 HADHBP55084 474 aaKnown RBP12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 RAB38P57729 211 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 RPS4XP62701 263 aaKnown RBP12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 EEF1A1P68104 462 aaKnown RBP12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 GAB1Q13480 694 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 EIPR1Q53HC9 387 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 EEF1A1P5Q5VTE0 462 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 ZNF474Q6S9Z5 364 aaPredicted RBP12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 CLEC17AQ6ZS10 378 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 SH2D5Q6ZV89 423 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 TBC1D19Q8N5T2 526 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 ANKRD53Q8N9V6 530 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 FAM47BQ8NA70 645 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 GABPB2Q8TAK5 448 aaPredicted RBP12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 NUBPLQ8TB37 319 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 WNT2BQ93097 391 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 ART5Q96L15 291 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 QRFPRQ96P65 431 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 UCN2Q96RP3 112 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 BPIFA3Q9BQP9 254 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 ADAM19Q9H013 955 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 SHARPINQ9H0F6 387 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 KLHL42Q9P2K6 505 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 LAMP3Q9UQV4 416 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 MED16Q9Y2X0 877 aa12.62□□□□□ -0.39
NKX3-1-202ENST00000523261 YLPM1P49750 1951 aaKnown RBP12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 A0A096LNT2 108 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 A0A1W2PNV4 684 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 ANKRD33BA6NCL7 494 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 SMTNL1A8MU46 457 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 C17orf105B2RV13 164 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 GOLGA8KD6RF30 607 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 GOLGA8TH3BQL2 631 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 ADAM11O75078 769 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 FBXO45P0C2W1 286 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 ENO3P13929 434 aaPredicted RBP12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 NMBRP28336 390 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 MTTPP55157 894 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 BTN3A2P78410 334 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 PCID2Q5JVF3 399 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 FNDC7Q5VTL7 733 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 MRNIPQ6NTE8 343 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 PIWIL4Q7Z3Z4 852 aaKnown RBP12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 SDCCAG8Q86SQ7 713 aaPredicted RBP12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 SLC15A4Q8N697 577 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms