RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 SF3B4Q15427 424 aaKnown RBP eCLIP15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 OCLNQ16625 522 aa15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 RPS27LQ71UM5 84 aaKnown RBP15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 BIRC7Q96CA5 298 aa15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 HS6ST2Q96MM7 605 aa15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 FCRL3Q96P31 734 aaPredicted RBP15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 DUSP23Q9BVJ7 150 aa15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 CLDN10P78369 228 aa15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 RABL3Q5HYI8 236 aa15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 C1orf189Q5VU69 101 aa15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 CWF19L1Q69YN2 538 aaKnown RBP15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 OR4C11Q6IEV9 310 aa15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 IGDCC3Q8IVU1 814 aa15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 OR8J3Q8NGG0 315 aa15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 ZNF317Q96PQ6 595 aaPredicted RBP15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 HSFX1Q9UBD0 423 aa15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 AASSQ9UDR5 926 aa15.58■□□□□ 0.08
PCDHA3-201ENST00000522353 APOC1P02654 83 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 PEPDP12955 493 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 OR2B6P58173 313 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 SLC10A2Q12908 348 aaPredicted RBP15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 GXYLT1Q4G148 440 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 HTR3DQ70Z44 454 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 PLD6Q8N2A8 252 aaKnown RBP15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 NAT6Q93015 286 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 HCFC1R1Q9NWW0 138 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 VSTM2BA6NLU5 285 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 GLP1RP43220 463 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 PLEKHG7Q6ZR37 379 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 FANK1Q8TC84 345 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 NSMAFQ92636 917 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 ISG20Q96AZ6 181 aaKnown RBP15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 SHISA4Q96DD7 197 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 APOOQ9BUR5 198 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 ITPAQ9BY32 194 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 GNG8Q9UK08 70 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 HCFC2Q9Y5Z7 792 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 LOC100130705A0A1B0GUX0 176 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 H3BUI4 141 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 PDLIM1O00151 329 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 CD63P08962 238 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 ARSAP15289 507 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 SERTAD2Q14140 314 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 SLC36A3Q495N2 470 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 C1orf220Q5T0J3 134 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 LRRC69Q6ZNQ3 347 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 ASB18Q6ZVZ8 466 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 TSPAN33Q86UF1 283 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 CARM1Q86X55 608 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 OR56A3Q8NH54 315 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 DIO2Q92813 273 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 BCKDHAP12694 445 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 ITIH1P19827 911 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 S1PR1P21453 382 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 ZBED5Q49AG3 693 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 MEDAGQ5VYS4 303 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 TREML1Q86YW5 311 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 PHTF2Q8N3S3 785 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 TOR1AIP2Q8NFQ8 470 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 TRMT2BQ96GJ1 504 aaKnown RBP15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 HHIPQ96QV1 700 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 FIZ1Q96SL8 496 aa15.57■□□□□ 0.08
PCDHA3-201ENST00000522353 KIR2DS5A0A0G2JLQ3 304 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 A0A0G2JNG1 304 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 KIR2DS3K7RE56 304 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 MT-ND5P03915 603 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 FDXRP22570 491 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 F8A1P23610 371 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 ACADVLP49748 655 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 CSTF1Q05048 431 aaKnown RBP15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 KIR2DS5Q14953 304 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 Q6ZSR6 202 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 SCD5Q86SK9 330 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 ZSWIM9Q86XI8 627 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 GID4Q8IVV7 300 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 MARCH4Q9P2E8 410 aaPredicted RBP15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 MALT1Q9UDY8 824 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 CHD2O14647 1828 aaKnown RBP15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 POLR1CO15160 346 aaPredicted RBP15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 DIO3P55073 304 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 RAB39AQ14964 217 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 FAM69BQ5VUD6 431 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 TMPRSS9Q7Z410 1059 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 KLHDC8AQ8IYD2 350 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 MINDY2Q8NBR6 621 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 ASB15Q8WXK1 588 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 NINJ1Q92982 152 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 PEX11GQ96HA9 241 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 FAM210AQ96ND0 272 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 IFNA21P01568 189 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 IL1RNP18510 177 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 SLC3A1Q07837 685 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 MAD2L1BPQ15013 274 aaPredicted RBP15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 NNATQ16517 81 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 SPATC1Q76KD6 591 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 DGLUCYQ7Z3D6 616 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 ZNF227Q86WZ6 799 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 PLCZ1Q86YW0 608 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 ZNF565Q8N9K5 539 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 HOXD1Q9GZZ0 328 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms