RNA–Protein interactions for RNA: ENST00000522262.1

CDH12-208, Transcript of cadherin 12, humanhuman

TSL 2 BASIC

Gene CDH12, Length 3,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-208ENST00000522262 DEFB109BQ30KR1 87 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 CRTC2Q53ET0 693 aaPredicted RBP6.29□□□□□ -1.4
CDH12-208ENST00000522262 C10orf62Q5T681 223 aaPredicted RBP6.29□□□□□ -1.4
CDH12-208ENST00000522262 NDUFAF5Q5TEU4 345 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 FAM47EQ6ZV65 393 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 GPR180Q86V85 440 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 EFCAB3Q8N7B9 438 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 GBP7Q8N8V2 638 aaPredicted RBP6.29□□□□□ -1.4
CDH12-208ENST00000522262 PLPP5Q8NEB5 264 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 CLHC1Q8NHS4 586 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 PPP1R14CQ8TAE6 165 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 RAB3IL1Q8TBN0 382 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 BBC3Q96PG8 261 aaPredicted RBP6.29□□□□□ -1.4
CDH12-208ENST00000522262 C1orf50Q9BV19 199 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 WDR55Q9H6Y2 383 aaPredicted RBP6.29□□□□□ -1.4
CDH12-208ENST00000522262 AKTIPQ9H8T0 292 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 EML4Q9HC35 981 aaKnown RBP6.29□□□□□ -1.4
CDH12-208ENST00000522262 INTS9Q9NV88 658 aaKnown RBP6.29□□□□□ -1.4
CDH12-208ENST00000522262 C14orf105Q9NVL8 296 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 FAM53CQ9NYF3 392 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 BAIAP2L1Q9UHR4 511 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 GPN3Q9UHW5 284 aaPredicted RBP6.29□□□□□ -1.4
CDH12-208ENST00000522262 FBXL4Q9UKA2 621 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 KCNMB2Q9Y691 235 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 ZNF891A8MT65 544 aaPredicted RBP6.29□□□□□ -1.4
CDH12-208ENST00000522262 PEX11AO75192 247 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 CLPSP04118 112 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 EMP2P54851 167 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 DIO3P55073 304 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 TAS2R50P59544 299 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 RPL38P63173 70 aaKnown RBP6.29□□□□□ -1.4
CDH12-208ENST00000522262 IGLV3-21P80748 117 aaPredicted RBP6.29□□□□□ -1.4
CDH12-208ENST00000522262 FOLH1Q04609 750 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 ZNF33BQ06732 778 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 ASPHQ12797 758 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 PTGR1Q14914 329 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 TBR1Q16650 682 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 GALNTL6Q49A17 601 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 ZNF385BQ569K4 471 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 C6orf136Q5SQH8 315 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 ANKRD26P1Q6NSI1 321 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 NOXRED1Q6NXP6 359 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 LRRC69Q6ZNQ3 347 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 RGS9BPQ6ZS82 235 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 LARP4Q71RC2 724 aaKnown RBP eCLIP6.29□□□□□ -1.4
CDH12-208ENST00000522262 DDIASQ8IXT1 998 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 GOLGA6L1Q8N7Z2 621 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 C16orf78Q8WTQ4 265 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 MAELQ96JY0 434 aaKnown RBP6.29□□□□□ -1.4
CDH12-208ENST00000522262 IMMP1LQ96LU5 166 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 OR52B2Q96RD2 323 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 NPAS2Q99743 824 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 EBF4Q9BQW3 602 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 SEMA4CQ9C0C4 833 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 ILKAPQ9H0C8 392 aaPredicted RBP6.29□□□□□ -1.4
CDH12-208ENST00000522262 COPS7BQ9H9Q2 264 aaPredicted RBP6.29□□□□□ -1.4
CDH12-208ENST00000522262 MEAF6Q9HAF1 191 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 ZBTB20Q9HC78 741 aaPredicted RBP6.29□□□□□ -1.4
CDH12-208ENST00000522262 MED4Q9NPJ6 270 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 SLAMF7Q9NQ25 335 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 MCM8Q9UJA3 840 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 ADAM29Q9UKF5 820 aa6.29□□□□□ -1.4
CDH12-208ENST00000522262 ARGFXA6NJG6 315 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 PRKNO60260 465 aaPredicted RBP6.28□□□□□ -1.4
CDH12-208ENST00000522262 MAN1A2O60476 641 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 CRCPO75575 148 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 SEC24DO94855 1032 aaPredicted RBP6.28□□□□□ -1.4
CDH12-208ENST00000522262 HEXBP07686 556 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 C8orf89P0DMQ9 161 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 CPN2P22792 545 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 EPHA3P29320 983 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 ST13P50502 369 aaKnown RBP6.28□□□□□ -1.4
CDH12-208ENST00000522262 GPR143P51810 404 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 PHEXP78562 749 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 NR6A1Q15406 480 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 TUBB8Q3ZCM7 444 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 DCAF10Q5QP82 559 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 CCNYL2Q5T2Q4 361 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 TMEM198Q66K66 360 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 FAM71E1Q6IPT2 247 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 KIF2BQ8N4N8 673 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 NFAM1Q8NET5 270 aaPredicted RBP6.28□□□□□ -1.4
CDH12-208ENST00000522262 SUN3Q8TAQ9 357 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 PTPMT1Q8WUK0 201 aaPredicted RBP6.28□□□□□ -1.4
CDH12-208ENST00000522262 PSMF1Q92530 271 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 PPWD1Q96BP3 646 aaKnown RBP6.28□□□□□ -1.4
CDH12-208ENST00000522262 CNRIP1Q96F85 164 aaPredicted RBP6.28□□□□□ -1.4
CDH12-208ENST00000522262 THOC1Q96FV9 657 aaKnown RBP6.28□□□□□ -1.4
CDH12-208ENST00000522262 TEX37Q96LM6 180 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 MAGEB18Q96M61 343 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 C7orf26Q96N11 449 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 PTCHD1Q96NR3 888 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 RPF2Q9H7B2 306 aaKnown RBP6.28□□□□□ -1.4
CDH12-208ENST00000522262 KCNK13Q9HB14 408 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 LRTM1Q9HBL6 345 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 SEMA3GQ9NS98 782 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 NXT1Q9UKK6 140 aaKnown RBP6.28□□□□□ -1.4
CDH12-208ENST00000522262 ERVK-11Q9UQG0 969 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 NUP214P35658 2090 aaPredicted RBP6.28□□□□□ -1.4
CDH12-208ENST00000522262 FAM208BQ5VWN6 2430 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms