RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 TFECO14948 347 aaPredicted RBP19.23■□□□□ 0.67
SDCBP-209ENST00000522243 HNRNPRO43390 633 aaKnown RBP19.23■□□□□ 0.67
SDCBP-209ENST00000522243 HS6ST1O60243 411 aa19.23■□□□□ 0.67
SDCBP-209ENST00000522243 FGF17O60258 216 aa19.23■□□□□ 0.67
SDCBP-209ENST00000522243 KLK8O60259 260 aa19.23■□□□□ 0.67
SDCBP-209ENST00000522243 SCELO95171 688 aa19.23■□□□□ 0.67
SDCBP-209ENST00000522243 SIX3O95343 332 aaPredicted RBP19.23■□□□□ 0.67
SDCBP-209ENST00000522243 ETHE1O95571 254 aa19.23■□□□□ 0.67
SDCBP-209ENST00000522243 SERPINB1P30740 379 aa19.23■□□□□ 0.67
SDCBP-209ENST00000522243 SOX3P41225 446 aa19.23■□□□□ 0.67
SDCBP-209ENST00000522243 HK2P52789 917 aa19.23■□□□□ 0.67
SDCBP-209ENST00000522243 GTF2H2Q13888 395 aa19.23■□□□□ 0.67
SDCBP-209ENST00000522243 GTF2H2CQ6P1K8 395 aa19.23■□□□□ 0.67
SDCBP-209ENST00000522243 C3P1Q6ZMU1 363 aa19.23■□□□□ 0.67
SDCBP-209ENST00000522243 GOLGA7Q7Z5G4 137 aa19.23■□□□□ 0.67
SDCBP-209ENST00000522243 FGD2Q7Z6J4 655 aa19.23■□□□□ 0.67
SDCBP-209ENST00000522243 CHERPQ8IWX8 916 aaKnown RBP19.23■□□□□ 0.67
SDCBP-209ENST00000522243 POGLUT1Q8NBL1 392 aa19.23■□□□□ 0.67
SDCBP-209ENST00000522243 NOA1Q8NC60 698 aaKnown RBP19.23■□□□□ 0.67
SDCBP-209ENST00000522243 SLC2A12Q8TD20 617 aa19.23■□□□□ 0.67
SDCBP-209ENST00000522243 DOK4Q8TEW6 326 aa19.23■□□□□ 0.67
SDCBP-209ENST00000522243 RGMAQ96B86 450 aa19.23■□□□□ 0.67
SDCBP-209ENST00000522243 TIMMDC1Q9NPL8 285 aa19.23■□□□□ 0.67
SDCBP-209ENST00000522243 HPF1Q9NWY4 346 aa19.23■□□□□ 0.67
SDCBP-209ENST00000522243 MYOTQ9UBF9 498 aa19.23■□□□□ 0.67
SDCBP-209ENST00000522243 ADGRE2Q9UHX3 823 aa19.23■□□□□ 0.67
SDCBP-209ENST00000522243 SYNDIG1LA6NDD5 238 aa19.22■□□□□ 0.67
SDCBP-209ENST00000522243 PLPP1O14494 284 aa19.22■□□□□ 0.67
SDCBP-209ENST00000522243 CDC40O60508 579 aaKnown RBP eCLIP19.22■□□□□ 0.67
SDCBP-209ENST00000522243 PRKRAO75569 313 aaKnown RBP19.22■□□□□ 0.67
SDCBP-209ENST00000522243 OR6B1O95007 311 aa19.22■□□□□ 0.67
SDCBP-209ENST00000522243 PIK3CBP42338 1070 aa19.22■□□□□ 0.67
SDCBP-209ENST00000522243 PIK3CGP48736 1102 aa19.22■□□□□ 0.67
SDCBP-209ENST00000522243 HNRNPH2P55795 449 aaKnown RBP19.22■□□□□ 0.67
SDCBP-209ENST00000522243 PCBP2Q15366 365 aaKnown RBP eCLIP19.22■□□□□ 0.67
SDCBP-209ENST00000522243 CPSF6Q16630 551 aaKnown RBP eCLIP19.22■□□□□ 0.67
SDCBP-209ENST00000522243 TECRLQ5HYJ1 363 aa19.22■□□□□ 0.67
SDCBP-209ENST00000522243 LIPJQ5W064 366 aa19.22■□□□□ 0.67
SDCBP-209ENST00000522243 C18orf63Q68DL7 685 aa19.22■□□□□ 0.67
SDCBP-209ENST00000522243 RPTNQ6XPR3 784 aa19.22■□□□□ 0.67
SDCBP-209ENST00000522243 MMGT1Q8N4V1 131 aa19.22■□□□□ 0.67
SDCBP-209ENST00000522243 PSD4Q8NDX1 1056 aa19.22■□□□□ 0.67
SDCBP-209ENST00000522243 IFT81Q8WYA0 676 aa19.22■□□□□ 0.67
SDCBP-209ENST00000522243 PPWD1Q96BP3 646 aaKnown RBP19.22■□□□□ 0.67
SDCBP-209ENST00000522243 PHF12Q96QT6 1004 aa19.22■□□□□ 0.67
SDCBP-209ENST00000522243 RASL10BQ96S79 203 aa19.22■□□□□ 0.67
SDCBP-209ENST00000522243 IPPKQ9H8X2 491 aa19.22■□□□□ 0.67
SDCBP-209ENST00000522243 DEPPQ9NTK1 212 aa19.22■□□□□ 0.67
SDCBP-209ENST00000522243 MEMO1Q9Y316 297 aa19.22■□□□□ 0.67
SDCBP-209ENST00000522243 RNF11Q9Y3C5 154 aa19.22■□□□□ 0.67
SDCBP-209ENST00000522243 PCDHGA11Q9Y5H2 935 aa19.22■□□□□ 0.67
SDCBP-209ENST00000522243 NCOA6Q14686 2063 aaPredicted RBP19.21■□□□□ 0.67
SDCBP-209ENST00000522243 PINLYPA6NC86 204 aa19.21■□□□□ 0.67
SDCBP-209ENST00000522243 INHBAP08476 426 aa19.21■□□□□ 0.67
SDCBP-209ENST00000522243 SNRPB2P08579 225 aaKnown RBP19.21■□□□□ 0.67
SDCBP-209ENST00000522243 PRF1P14222 555 aa19.21■□□□□ 0.67
SDCBP-209ENST00000522243 HTR1EP28566 365 aa19.21■□□□□ 0.67
SDCBP-209ENST00000522243 NEK2P51955 445 aa19.21■□□□□ 0.67
SDCBP-209ENST00000522243 RNF4P78317 190 aa19.21■□□□□ 0.67
SDCBP-209ENST00000522243 ZNF750Q32MQ0 723 aa19.21■□□□□ 0.67
SDCBP-209ENST00000522243 XKRXQ6PP77 449 aa19.21■□□□□ 0.67
SDCBP-209ENST00000522243 BNC2Q6ZN30 1099 aaPredicted RBP19.21■□□□□ 0.67
SDCBP-209ENST00000522243 DOLPP1Q86YN1 238 aa19.21■□□□□ 0.67
SDCBP-209ENST00000522243 PTGR2Q8N8N7 351 aaPredicted RBP19.21■□□□□ 0.67
SDCBP-209ENST00000522243 C16orf52Q8NHV5 167 aa19.21■□□□□ 0.67
SDCBP-209ENST00000522243 UHMK1Q8TAS1 419 aaKnown RBP19.21■□□□□ 0.67
SDCBP-209ENST00000522243 AGAP11Q8TF27 550 aa19.21■□□□□ 0.67
SDCBP-209ENST00000522243 SLC44A1Q8WWI5 657 aa19.21■□□□□ 0.67
SDCBP-209ENST00000522243 PHF21BQ96EK2 531 aa19.21■□□□□ 0.67
SDCBP-209ENST00000522243 DGAT2Q96PD7 388 aa19.21■□□□□ 0.67
SDCBP-209ENST00000522243 CDK15Q96Q40 435 aa19.21■□□□□ 0.67
SDCBP-209ENST00000522243 CENPKQ9BS16 269 aa19.21■□□□□ 0.67
SDCBP-209ENST00000522243 RPF2Q9H7B2 306 aaKnown RBP19.21■□□□□ 0.67
SDCBP-209ENST00000522243 ATG4BQ9Y4P1 393 aa19.21■□□□□ 0.67
SDCBP-209ENST00000522243 KLF2Q9Y5W3 355 aaPredicted RBP19.21■□□□□ 0.67
SDCBP-209ENST00000522243 A0A1B0GTH9 108 aa19.2■□□□□ 0.66
SDCBP-209ENST00000522243 CCDC189A1A4V9 331 aa19.2■□□□□ 0.66
SDCBP-209ENST00000522243 WASHC1A8K0Z3 465 aa19.2■□□□□ 0.66
SDCBP-209ENST00000522243 POC1B-GALNT4F8VUJ3 575 aa19.2■□□□□ 0.66
SDCBP-209ENST00000522243 G3V3Y1 287 aa19.2■□□□□ 0.66
SDCBP-209ENST00000522243 ZNF354AO60765 605 aaPredicted RBP19.2■□□□□ 0.66
SDCBP-209ENST00000522243 PDE9AO76083 593 aa19.2■□□□□ 0.66
SDCBP-209ENST00000522243 TUBB4AP04350 444 aa19.2■□□□□ 0.66
SDCBP-209ENST00000522243 ARL1P40616 181 aaPredicted RBP19.2■□□□□ 0.66
SDCBP-209ENST00000522243 NR0B1P51843 470 aaKnown RBP19.2■□□□□ 0.66
SDCBP-209ENST00000522243 SMSP52788 366 aa19.2■□□□□ 0.66
SDCBP-209ENST00000522243 PHEXP78562 749 aa19.2■□□□□ 0.66
SDCBP-209ENST00000522243 CDSNQ15517 529 aa19.2■□□□□ 0.66
SDCBP-209ENST00000522243 DGAT2L6Q6ZPD8 337 aa19.2■□□□□ 0.66
SDCBP-209ENST00000522243 CEP128Q6ZU80 1094 aa19.2■□□□□ 0.66
SDCBP-209ENST00000522243 GPR180Q86V85 440 aa19.2■□□□□ 0.66
SDCBP-209ENST00000522243 RELL1Q8IUW5 271 aa19.2■□□□□ 0.66
SDCBP-209ENST00000522243 SRRM1Q8IYB3 904 aaKnown RBP19.2■□□□□ 0.66
SDCBP-209ENST00000522243 ZFP62Q8NB50 900 aaPredicted RBP19.2■□□□□ 0.66
SDCBP-209ENST00000522243 OR52N2Q8NGI0 321 aa19.2■□□□□ 0.66
SDCBP-209ENST00000522243 ZNF721Q8TF20 911 aa19.2■□□□□ 0.66
SDCBP-209ENST00000522243 MTFMTQ96DP5 389 aaKnown RBP19.2■□□□□ 0.66
SDCBP-209ENST00000522243 SCYL1Q96KG9 808 aa19.2■□□□□ 0.66
SDCBP-209ENST00000522243 FUT8Q9BYC5 575 aa19.2■□□□□ 0.66
SDCBP-209ENST00000522243 TNPO3Q9Y5L0 923 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms