RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 C4orf33Q8N1A6 199 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 APCDD1LQ8NCL9 501 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 TMEM52Q8NDY8 209 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 C17orf47Q8NEP4 570 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 NUBPLQ8TB37 319 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.84□□□□□ -0.99
CLK4-209ENST00000521621 TCP10LQ8TDR4 215 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 MIB2Q96AX9 1013 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 C8orf44Q96CB5 159 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 SCMH1Q96GD3 660 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 CDK15Q96Q40 435 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 GATA5Q9BWX5 397 aaPredicted RBP8.84□□□□□ -0.99
CLK4-209ENST00000521621 RPF2Q9H7B2 306 aaKnown RBP8.84□□□□□ -0.99
CLK4-209ENST00000521621 WDR41Q9HAD4 459 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 ABI3Q9P2A4 366 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 A0A1W2PR48 441 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 TLDC2A0PJX2 215 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 PPP6CO00743 305 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 TMPRSS11DO60235 418 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 B4GALT2O60909 372 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 EEDO75530 441 aaKnown RBP8.84□□□□□ -0.99
CLK4-209ENST00000521621 B3GALT4O96024 378 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 IGKV3-11P04433 115 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 GRK2P25098 689 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 HMOX2P30519 316 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 CLCN2P51788 898 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 NAGLUP54802 743 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 MLF1P58340 268 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 FOXK1P85037 733 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 TLR1Q15399 786 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 SLC6A19Q695T7 634 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 COMMD6Q7Z4G1 85 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 Q8NA96 180 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 OR7G1Q8NGA0 311 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 OR1N1Q8NGS0 311 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 DNAJB8Q8NHS0 232 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 PTPMT1Q8WUK0 201 aaPredicted RBP8.84□□□□□ -0.99
CLK4-209ENST00000521621 CSF3RQ99062 836 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 ACPTQ9BZG2 426 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 MID1IP1Q9NPA3 183 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.84□□□□□ -0.99
CLK4-209ENST00000521621 ATG4BQ9Y4P1 393 aa8.84□□□□□ -0.99
CLK4-209ENST00000521621 V9GYY5 206 aaPredicted RBP8.84□□□□□ -0.99
CLK4-209ENST00000521621 FAM227AF5H4B4 570 aa8.84□□□□□ -1
CLK4-209ENST00000521621 ALOX15P16050 662 aaPredicted RBP8.84□□□□□ -1
CLK4-209ENST00000521621 MAOAP21397 527 aa8.84□□□□□ -1
CLK4-209ENST00000521621 NEK2P51955 445 aa8.84□□□□□ -1
CLK4-209ENST00000521621 HNRNPFP52597 415 aaKnown RBP8.84□□□□□ -1
CLK4-209ENST00000521621 FOXL2P58012 376 aa8.84□□□□□ -1
CLK4-209ENST00000521621 UGT3A2Q3SY77 523 aa8.84□□□□□ -1
CLK4-209ENST00000521621 CFAP157Q5JU67 520 aa8.84□□□□□ -1
CLK4-209ENST00000521621 SLC48A1Q6P1K1 146 aa8.84□□□□□ -1
CLK4-209ENST00000521621 ZNF605Q86T29 641 aa8.84□□□□□ -1
CLK4-209ENST00000521621 CLYBLQ8N0X4 340 aa8.84□□□□□ -1
CLK4-209ENST00000521621 TEX19Q8NA77 164 aa8.84□□□□□ -1
CLK4-209ENST00000521621 MDS2Q8NDY4 140 aa8.84□□□□□ -1
CLK4-209ENST00000521621 BRIX1Q8TDN6 353 aaKnown RBP8.84□□□□□ -1
CLK4-209ENST00000521621 TM4SF18Q96CE8 201 aa8.84□□□□□ -1
CLK4-209ENST00000521621 FAIM2Q9BWQ8 316 aa8.84□□□□□ -1
CLK4-209ENST00000521621 TMBIM4Q9HC24 238 aa8.84□□□□□ -1
CLK4-209ENST00000521621 RRAGDQ9NQL2 400 aaPredicted RBP8.84□□□□□ -1
CLK4-209ENST00000521621 WDR70Q9NW82 654 aa8.84□□□□□ -1
CLK4-209ENST00000521621 ASIC5Q9NY37 505 aa8.84□□□□□ -1
CLK4-209ENST00000521621 SPTBP11277 2137 aa8.84□□□□□ -1
CLK4-209ENST00000521621 TRAV17A0A0B4J275 112 aa8.83□□□□□ -1
CLK4-209ENST00000521621 CLEC18AA5D8T8 446 aa8.83□□□□□ -1
CLK4-209ENST00000521621 FFAR3O14843 346 aa8.83□□□□□ -1
CLK4-209ENST00000521621 GPR42O15529 346 aa8.83□□□□□ -1
CLK4-209ENST00000521621 DDAH2O95865 285 aa8.83□□□□□ -1
CLK4-209ENST00000521621 ATP1B1P05026 303 aa8.83□□□□□ -1
CLK4-209ENST00000521621 COX7A2P14406 83 aa8.83□□□□□ -1
CLK4-209ENST00000521621 TIA1P31483 386 aaKnown RBP eCLIP8.83□□□□□ -1
CLK4-209ENST00000521621 TNFSF10P50591 281 aa8.83□□□□□ -1
CLK4-209ENST00000521621 C21orf58P58505 322 aa8.83□□□□□ -1
CLK4-209ENST00000521621 RAE1P78406 368 aaKnown RBP8.83□□□□□ -1
CLK4-209ENST00000521621 PLIN5Q00G26 463 aa8.83□□□□□ -1
CLK4-209ENST00000521621 NFATC3Q12968 1075 aa8.83□□□□□ -1
CLK4-209ENST00000521621 SLC13A2Q13183 592 aa8.83□□□□□ -1
CLK4-209ENST00000521621 ZNF169Q14929 603 aaPredicted RBP8.83□□□□□ -1
CLK4-209ENST00000521621 MPEG1Q2M385 716 aa8.83□□□□□ -1
CLK4-209ENST00000521621 CLEC18BQ6UXF7 455 aa8.83□□□□□ -1
CLK4-209ENST00000521621 CDYL2Q8N8U2 506 aa8.83□□□□□ -1
CLK4-209ENST00000521621 CLEC18CQ8NCF0 446 aa8.83□□□□□ -1
CLK4-209ENST00000521621 GALNT11Q8NCW6 608 aa8.83□□□□□ -1
CLK4-209ENST00000521621 ZNF675Q8TD23 568 aa8.83□□□□□ -1
CLK4-209ENST00000521621 FBXL20Q96IG2 436 aa8.83□□□□□ -1
CLK4-209ENST00000521621 ALOXE3Q9BYJ1 711 aa8.83□□□□□ -1
CLK4-209ENST00000521621 MYNNQ9NPC7 610 aa8.83□□□□□ -1
CLK4-209ENST00000521621 PFDN4Q9NQP4 134 aa8.83□□□□□ -1
CLK4-209ENST00000521621 ZNF639Q9UID6 485 aa8.83□□□□□ -1
CLK4-209ENST00000521621 OR5H15A6NDH6 313 aa8.83□□□□□ -1
CLK4-209ENST00000521621 AZIN1O14977 448 aa8.83□□□□□ -1
CLK4-209ENST00000521621 DYRK3O43781 588 aa8.83□□□□□ -1
CLK4-209ENST00000521621 SEC24DO94855 1032 aaPredicted RBP8.83□□□□□ -1
CLK4-209ENST00000521621 AIFM1O95831 613 aa8.83□□□□□ -1
CLK4-209ENST00000521621 H2AFXP16104 143 aaPredicted RBP8.83□□□□□ -1
CLK4-209ENST00000521621 STX4Q12846 297 aa8.83□□□□□ -1
CLK4-209ENST00000521621 MAP4K2Q12851 820 aa8.83□□□□□ -1
CLK4-209ENST00000521621 KIAA0040Q15053 153 aa8.83□□□□□ -1
CLK4-209ENST00000521621 BTBD16Q32M84 506 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms