RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 HAUS1Q96CS2 278 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 HDAC11Q96DB2 347 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 METTL2AQ96IZ6 378 aaKnown RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 CCDC114Q96M63 670 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 OLFM3Q96PB7 478 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 QKIQ96PU8 341 aaKnown RBP eCLIP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 PSKH2Q96QS6 385 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 NAP1L3Q99457 506 aaPredicted RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 VAT1Q99536 393 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 LGMNQ99538 433 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 IL12RB2Q99665 862 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 SPRY4Q9C004 299 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 SLC25A18Q9H1K4 315 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 RSPH9Q9H1X1 276 aaPredicted RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 FKRPQ9H9S5 495 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 MAGEE1Q9HCI5 957 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 SDF2L1Q9HCN8 221 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 ZDHHC4Q9NPG8 344 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 PRSS16Q9NQE7 514 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 HOMER3Q9NSC5 361 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 C20orf141Q9NUB4 165 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 HAUS2Q9NVX0 235 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 RBM22Q9NW64 420 aaKnown RBP eCLIP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 C2orf42Q9NWW7 574 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 RNF14Q9UBS8 474 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 AMACRQ9UHK6 382 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 A4GNTQ9UNA3 340 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 TCF19Q9Y242 345 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 SAR1BQ9Y6B6 198 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 TCRBV21S2A2A0A5A6 115 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 C5orf60A6NFR6 353 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 TMEM202A6NGA9 273 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 USP17L23D6RBM5 183 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 KCNK1O00180 336 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 RNF103O00237 685 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 PGRMC1O00264 195 aaKnown RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 P2RY10O00398 339 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 ALOX15BO15296 676 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 BCAT2O15382 392 aaPredicted RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 KCNN4O15554 427 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 RNASEH1O60930 286 aaKnown RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 NEBLO76041 1014 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 SEC14L2O76054 403 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 CCNDBP1O95273 360 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 IGSF6O95976 241 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 CGAP01215 116 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 JCHAINP01591 159 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 TFP02787 698 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 HOXB5P09067 269 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 SPARCP09486 303 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 TDGF1P13385 188 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 GABRG2P18507 467 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 CHMP24386 653 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 PTPN3P26045 913 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 EPHA8P29322 1005 aaPredicted RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 OXTRP30559 389 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 STIP1P31948 543 aaKnown RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 CHRNA3P32297 505 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 DEKP35659 375 aaKnown RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 RGRP47804 291 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 NUMBP49757 651 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 CCNHP51946 323 aaPredicted RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 HILS1P60008 231 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 RHOAP61586 193 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 AP1S1P61966 158 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 EEF1A1P68104 462 aaKnown RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 CSTF1Q05048 431 aaKnown RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 RAD51Q06609 339 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 NIPAL4Q0D2K0 466 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 AP1B1Q10567 949 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 WASHC5Q12768 1159 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 SNX1Q13596 522 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 TUBB2AQ13885 445 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 ZNF235Q14590 738 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 MRGPRG-AS1Q2M3A8 158 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 ATG2AQ2TAZ0 1938 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 CHD9Q3L8U1 2897 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 MMEL1Q495T6 779 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 SLC9B1Q4ZJI4 515 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 TEX44Q53QW1 395 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 ZNF805Q5CZA5 627 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 EEF1A1P5Q5VTE0 462 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 FAM46CQ5VWP2 391 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 ZNF776Q68DI1 518 aaPredicted RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 C22orf39Q6P5X5 142 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 KCTD18Q6PI47 426 aaPredicted RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 NCEH1Q6PIU2 408 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 PID1Q7Z2X4 250 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 SMIM29Q86T20 159 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 MMAAQ8IVH4 418 aaKnown RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 MAML2Q8IZL2 1156 aaPredicted RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 RYBPQ8N488 228 aaPredicted RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 PRELID2Q8N945 189 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 TSTD1Q8NFU3 115 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 DMBX1Q8NFW5 382 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 OR2AP1Q8NGE2 309 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 OR13A1Q8NGR1 328 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 HCAR2Q8TDS4 363 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 LRRC8CQ8TDW0 803 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 C1orf54Q8WWF1 131 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms