RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 OR51I1Q9H343 314 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 MYNNQ9NPC7 610 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 SOHLH2Q9NX45 425 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 HEBP2Q9Y5Z4 205 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 KCNE1BA0A087WTH5 132 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 FOXE1O00358 373 aaPredicted RBP9.68□□□□□ -0.86
MCF2-209ENST00000520602 IFNA16P05015 189 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 CD247P20963 164 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 FUT4P22083 530 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 NOS3P29474 1203 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 AKT2P31751 481 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 TMEM107Q6UX40 140 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 AMIGO1Q86WK6 493 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 ZNF761Q86XN6 746 aaPredicted RBP9.68□□□□□ -0.86
MCF2-209ENST00000520602 ZNF655Q8N720 491 aaPredicted RBP9.68□□□□□ -0.86
MCF2-209ENST00000520602 TEX47Q8TBZ9 253 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 RASSF5Q8WWW0 418 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 SLC38A4Q969I6 547 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 METTL2AQ96IZ6 378 aaKnown RBP9.68□□□□□ -0.86
MCF2-209ENST00000520602 PIP5K1AQ99755 562 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 APOOQ9BUR5 198 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 SLC52A3Q9NQ40 469 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 PIAS3Q9Y6X2 628 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 PATJQ8NI35 1801 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 ZFC3H1O60293 1989 aaKnown RBP9.67□□□□□ -0.86
MCF2-209ENST00000520602 SOBPA7XYQ1 873 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 EFCAB9A8MZ26 197 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 PRKRAO75569 313 aaKnown RBP9.67□□□□□ -0.86
MCF2-209ENST00000520602 TSPAN19P0C672 248 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 DDCP20711 480 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 CDH3P22223 829 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 SERPINB1P30740 379 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 ZFP36L2P47974 494 aaKnown RBP9.67□□□□□ -0.86
MCF2-209ENST00000520602 XKP51811 444 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 FCHO2Q0JRZ9 810 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 GPR68Q15743 365 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 IQCCQ4KMZ1 466 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 CRB2Q5IJ48 1285 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 OR8H2Q8N162 312 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 CYP4Z2PQ8N1L4 340 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 ZNF420Q8TAQ5 688 aaPredicted RBP9.67□□□□□ -0.86
MCF2-209ENST00000520602 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.67□□□□□ -0.86
MCF2-209ENST00000520602 ZNF300Q96RE9 604 aaPredicted RBP9.67□□□□□ -0.86
MCF2-209ENST00000520602 RPP25Q9BUL9 199 aaKnown RBP9.67□□□□□ -0.86
MCF2-209ENST00000520602 TEX10Q9NXF1 929 aaPredicted RBP9.67□□□□□ -0.86
MCF2-209ENST00000520602 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.67□□□□□ -0.86
MCF2-209ENST00000520602 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.67□□□□□ -0.86
MCF2-209ENST00000520602 H3BQ06 376 aaPredicted RBP9.67□□□□□ -0.86
MCF2-209ENST00000520602 C1QCP02747 245 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 ZXDCQ2QGD7 858 aaPredicted RBP9.67□□□□□ -0.86
MCF2-209ENST00000520602 TMEM52BQ4KMG9 183 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 ZNF311Q5JNZ3 666 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 OLIG3Q7RTU3 272 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 CDK20Q8IZL9 346 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 SLC35C2Q9NQQ7 365 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 ETAA1Q9NY74 926 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 DNAJC27Q9NZQ0 273 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 MYO10Q9HD67 2058 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 TRPM6Q9BX84 2022 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 EFEMP2O95967 443 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 HPGDP15428 266 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 RYKP34925 604 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 OLR1P78380 273 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 PRDX1Q06830 199 aaKnown RBP9.67□□□□□ -0.86
MCF2-209ENST00000520602 MADCAM1Q13477 382 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 RAB30Q15771 203 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 TSPYL5Q86VY4 417 aaPredicted RBP9.67□□□□□ -0.86
MCF2-209ENST00000520602 DNASE1L2Q92874 299 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 SLC22A18Q96BI1 424 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 SPATA9Q9BWV2 254 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 PRRG3Q9BZD7 231 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 ABCG4Q9H172 646 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 MS4A12Q9NXJ0 267 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 MAT2BQ9NZL9 334 aa9.67□□□□□ -0.86
MCF2-209ENST00000520602 NINQ8N4C6 2090 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 TCRBV21S2A2A0A5A6 115 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 OR6C74A6NCV1 312 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 EFCAB10A6NFE3 127 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 PLPP1O14494 284 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 LINC01565O15544 149 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 B3GALT2O43825 422 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 LCKP06239 509 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 STSP08842 583 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 CCDC159P0C7I6 412 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 CERS1P27544 350 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 GSTM2P28161 218 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 ALDH3B2P48448 385 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 CCR4P51679 360 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 MLLT1Q03111 559 aaPredicted RBP9.66□□□□□ -0.86
MCF2-209ENST00000520602 ST3GAL4Q11206 333 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 NFATC3Q12968 1075 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 PIN1Q13526 163 aaPredicted RBP9.66□□□□□ -0.86
MCF2-209ENST00000520602 DUSP6Q16828 381 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 WDR53Q7Z5U6 358 aaPredicted RBP9.66□□□□□ -0.86
MCF2-209ENST00000520602 ZNF547Q8IVP9 402 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 NATD1Q8N6N6 113 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 HORMAD2Q8N7B1 307 aa9.66□□□□□ -0.86
MCF2-209ENST00000520602 IPCEF1Q8WWN9 437 aaPredicted RBP9.66□□□□□ -0.86
MCF2-209ENST00000520602 DACT3Q96B18 629 aaPredicted RBP9.66□□□□□ -0.86
MCF2-209ENST00000520602 MTERF3Q96E29 417 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms