RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 ATG16L1Q676U5 607 aa21.2■□□□□ 0.98
SKP1-206ENST00000519321 GALNT18Q6P9A2 607 aa21.2■□□□□ 0.98
SKP1-206ENST00000519321 FAM76AQ8TAV0 307 aa21.2■□□□□ 0.98
SKP1-206ENST00000519321 TWIST2Q8WVJ9 160 aa21.2■□□□□ 0.98
SKP1-206ENST00000519321 IMMP1LQ96LU5 166 aa21.2■□□□□ 0.98
SKP1-206ENST00000519321 MESP1Q9BRJ9 268 aa21.2■□□□□ 0.98
SKP1-206ENST00000519321 SLC25A23Q9BV35 468 aa21.2■□□□□ 0.98
SKP1-206ENST00000519321 ZDHHC2Q9UIJ5 367 aa21.2■□□□□ 0.98
SKP1-206ENST00000519321 RAP2CQ9Y3L5 183 aa21.2■□□□□ 0.98
SKP1-206ENST00000519321 PCDHGB7Q9Y5F8 929 aa21.2■□□□□ 0.98
SKP1-206ENST00000519321 A0A1W2PR48 441 aa21.19■□□□□ 0.98
SKP1-206ENST00000519321 MYO1DO94832 1006 aa21.19■□□□□ 0.98
SKP1-206ENST00000519321 ARRB2P32121 409 aa21.19■□□□□ 0.98
SKP1-206ENST00000519321 BTKQ06187 659 aa21.19■□□□□ 0.98
SKP1-206ENST00000519321 MYBPC3Q14896 1274 aa21.19■□□□□ 0.98
SKP1-206ENST00000519321 TERF2Q15554 542 aa21.19■□□□□ 0.98
SKP1-206ENST00000519321 UGT3A2Q3SY77 523 aa21.19■□□□□ 0.98
SKP1-206ENST00000519321 PAPD4Q6PIY7 484 aaKnown RBP21.19■□□□□ 0.98
SKP1-206ENST00000519321 PCSK4Q6UW60 755 aa21.19■□□□□ 0.98
SKP1-206ENST00000519321 PARP9Q8IXQ6 854 aa21.19■□□□□ 0.98
SKP1-206ENST00000519321 C9orf43Q8TAL5 461 aaPredicted RBP21.19■□□□□ 0.98
SKP1-206ENST00000519321 ABHD17AQ96GS6 310 aa21.19■□□□□ 0.98
SKP1-206ENST00000519321 APIPQ96GX9 242 aa21.19■□□□□ 0.98
SKP1-206ENST00000519321 FAIM2Q9BWQ8 316 aa21.19■□□□□ 0.98
SKP1-206ENST00000519321 LHPPQ9H008 270 aa21.19■□□□□ 0.98
SKP1-206ENST00000519321 GPR83Q9NYM4 423 aa21.19■□□□□ 0.98
SKP1-206ENST00000519321 SCN2AQ99250 2005 aa21.18■□□□□ 0.98
SKP1-206ENST00000519321 IGHV3-20A0A0C4DH32 117 aa21.18■□□□□ 0.98
SKP1-206ENST00000519321 GNG14A0A1W2PPG7 69 aa21.18■□□□□ 0.98
SKP1-206ENST00000519321 C1orf226A1L170 272 aa21.18■□□□□ 0.98
SKP1-206ENST00000519321 ITM2AO43736 263 aa21.18■□□□□ 0.98
SKP1-206ENST00000519321 PCDH7O60245 1069 aa21.18■□□□□ 0.98
SKP1-206ENST00000519321 SEC24DO94855 1032 aaPredicted RBP21.18■□□□□ 0.98
SKP1-206ENST00000519321 AIFM1O95831 613 aa21.18■□□□□ 0.98
SKP1-206ENST00000519321 SERPINA7P05543 415 aa21.18■□□□□ 0.98
SKP1-206ENST00000519321 TIA1P31483 386 aaKnown RBP eCLIP21.18■□□□□ 0.982e-8■■■■□ 23.8
SKP1-206ENST00000519321 BST1Q10588 318 aa21.18■□□□□ 0.98
SKP1-206ENST00000519321 C18orf63Q68DL7 685 aa21.18■□□□□ 0.98
SKP1-206ENST00000519321 PLAG1Q6DJT9 500 aa21.18■□□□□ 0.98
SKP1-206ENST00000519321 OR52E8Q6IFG1 317 aa21.18■□□□□ 0.98
SKP1-206ENST00000519321 TCTN3Q6NUS6 607 aa21.18■□□□□ 0.98
SKP1-206ENST00000519321 JMJD6Q6NYC1 403 aaPredicted RBP21.18■□□□□ 0.98
SKP1-206ENST00000519321 CLNKQ7Z7G1 428 aa21.18■□□□□ 0.98
SKP1-206ENST00000519321 DDIASQ8IXT1 998 aa21.18■□□□□ 0.98
SKP1-206ENST00000519321 EXD3Q8N9H8 876 aa21.18■□□□□ 0.98
SKP1-206ENST00000519321 AGR3Q8TD06 166 aa21.18■□□□□ 0.98
SKP1-206ENST00000519321 C11orf24Q96F05 449 aaPredicted RBP21.18■□□□□ 0.98
SKP1-206ENST00000519321 WDR77Q9BQA1 342 aaPredicted RBP21.18■□□□□ 0.98
SKP1-206ENST00000519321 ALOXE3Q9BYJ1 711 aa21.18■□□□□ 0.98
SKP1-206ENST00000519321 ADAP2Q9NPF8 381 aa21.18■□□□□ 0.98
SKP1-206ENST00000519321 CCL27Q9Y4X3 112 aa21.18■□□□□ 0.98
SKP1-206ENST00000519321 ITPR1Q14643 2758 aa21.17■□□□□ 0.98
SKP1-206ENST00000519321 A6NL46 340 aa21.17■□□□□ 0.98
SKP1-206ENST00000519321 TMEM233B4DJY2 109 aa21.17■□□□□ 0.98
SKP1-206ENST00000519321 LDB3O75112 727 aa21.17■□□□□ 0.98
SKP1-206ENST00000519321 SEC22BO75396 215 aa21.17■□□□□ 0.98
SKP1-206ENST00000519321 LYPLA1O75608 230 aaPredicted RBP21.17■□□□□ 0.98
SKP1-206ENST00000519321 ALPPP05187 535 aa21.17■□□□□ 0.98
SKP1-206ENST00000519321 BTBD16Q32M84 506 aa21.17■□□□□ 0.98
SKP1-206ENST00000519321 NDUFAF5Q5TEU4 345 aa21.17■□□□□ 0.98
SKP1-206ENST00000519321 HPS6Q86YV9 775 aa21.17■□□□□ 0.98
SKP1-206ENST00000519321 FDCSPQ8NFU4 85 aa21.17■□□□□ 0.98
SKP1-206ENST00000519321 M1APQ8TC57 530 aa21.17■□□□□ 0.98
SKP1-206ENST00000519321 TM4SF18Q96CE8 201 aa21.17■□□□□ 0.98
SKP1-206ENST00000519321 THOC3Q96J01 351 aaKnown RBP21.17■□□□□ 0.98
SKP1-206ENST00000519321 TUBB1Q9H4B7 451 aa21.17■□□□□ 0.98
SKP1-206ENST00000519321 MANSC1Q9H8J5 431 aa21.17■□□□□ 0.98
SKP1-206ENST00000519321 LRTM1Q9HBL6 345 aa21.17■□□□□ 0.98
SKP1-206ENST00000519321 THAP1Q9NVV9 213 aa21.17■□□□□ 0.98
SKP1-206ENST00000519321 ZNF446Q9NWS9 450 aa21.17■□□□□ 0.98
SKP1-206ENST00000519321 C1orf109Q9NX04 203 aa21.17■□□□□ 0.98
SKP1-206ENST00000519321 TEX10Q9NXF1 929 aaPredicted RBP21.17■□□□□ 0.98
SKP1-206ENST00000519321 VTI1BQ9UEU0 232 aa21.17■□□□□ 0.98
SKP1-206ENST00000519321 HAO1Q9UJM8 370 aa21.17■□□□□ 0.98
SKP1-206ENST00000519321 WBP11Q9Y2W2 641 aaKnown RBP21.17■□□□□ 0.98
SKP1-206ENST00000519321 CLDN16Q9Y5I7 305 aa21.17■□□□□ 0.98
SKP1-206ENST00000519321 SAGE2PA6NJ88 616 aa21.16■□□□□ 0.98
SKP1-206ENST00000519321 PIP5K1BO14986 540 aa21.16■□□□□ 0.98
SKP1-206ENST00000519321 ATP8B1O43520 1251 aa21.16■□□□□ 0.98
SKP1-206ENST00000519321 IFNA16P05015 189 aa21.16■□□□□ 0.98
SKP1-206ENST00000519321 ANXA4P09525 319 aaPredicted RBP21.16■□□□□ 0.98
SKP1-206ENST00000519321 LINC00032P0C843 101 aa21.16■□□□□ 0.98
SKP1-206ENST00000519321 PRR35P0CG20 571 aa21.16■□□□□ 0.98
SKP1-206ENST00000519321 DRD2P14416 443 aa21.16■□□□□ 0.98
SKP1-206ENST00000519321 RPL14P50914 215 aaKnown RBP21.16■□□□□ 0.98
SKP1-206ENST00000519321 PGDP52209 483 aa21.16■□□□□ 0.98
SKP1-206ENST00000519321 PPP2R2AP63151 447 aa21.16■□□□□ 0.98
SKP1-206ENST00000519321 RAE1P78406 368 aaKnown RBP21.16■□□□□ 0.98
SKP1-206ENST00000519321 IGLV3-21P80748 117 aaPredicted RBP21.16■□□□□ 0.98
SKP1-206ENST00000519321 LY6DQ14210 128 aa21.16■□□□□ 0.98
SKP1-206ENST00000519321 NR6A1Q15406 480 aa21.16■□□□□ 0.98
SKP1-206ENST00000519321 ELAVL1Q15717 326 aaKnown RBP21.16■□□□□ 0.98
SKP1-206ENST00000519321 CES4AQ5XG92 561 aa21.16■□□□□ 0.98
SKP1-206ENST00000519321 ATG14Q6ZNE5 492 aa21.16■□□□□ 0.98
SKP1-206ENST00000519321 Q6ZSR9 355 aa21.16■□□□□ 0.98
SKP1-206ENST00000519321 TMEM132CQ8N3T6 1108 aa21.16■□□□□ 0.98
SKP1-206ENST00000519321 ZNF781Q8N8C0 355 aa21.16■□□□□ 0.98
SKP1-206ENST00000519321 ANKRD9Q96BM1 317 aaPredicted RBP21.16■□□□□ 0.98
SKP1-206ENST00000519321 PELOQ9BRX2 385 aaKnown RBP21.16■□□□□ 0.98
SKP1-206ENST00000519321 SLC25A18Q9H1K4 315 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms