RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	RBPJ	Q06330	500 aa		22.55	■■□□□ 1.2
CNOT7-204	ENST00000518885	SPINK14	Q6IE38	97 aa		22.55	■■□□□ 1.2
CNOT7-204	ENST00000518885	SLC25A25	Q6KCM7	469 aa		22.55	■■□□□ 1.2
CNOT7-204	ENST00000518885	HSDL2	Q6YN16	418 aa		22.55	■■□□□ 1.2
CNOT7-204	ENST00000518885	TMEM156	Q8N614	296 aa		22.55	■■□□□ 1.2
CNOT7-204	ENST00000518885	ZNF483	Q8TF39	744 aa	Predicted RBP	22.55	■■□□□ 1.2
CNOT7-204	ENST00000518885	UBLCP1	Q8WVY7	318 aa	Predicted RBP	22.55	■■□□□ 1.2
CNOT7-204	ENST00000518885	SCMH1	Q96GD3	660 aa		22.55	■■□□□ 1.2
CNOT7-204	ENST00000518885	RBM18	Q96H35	190 aa	Known RBP	22.55	■■□□□ 1.2
CNOT7-204	ENST00000518885	ART5	Q96L15	291 aa		22.55	■■□□□ 1.2
CNOT7-204	ENST00000518885	DGAT2	Q96PD7	388 aa		22.55	■■□□□ 1.2
CNOT7-204	ENST00000518885	SIGLEC12	Q96PQ1	595 aa		22.55	■■□□□ 1.2
CNOT7-204	ENST00000518885	CDK15	Q96Q40	435 aa		22.55	■■□□□ 1.2
CNOT7-204	ENST00000518885	TAAR6	Q96RI8	345 aa		22.55	■■□□□ 1.2
CNOT7-204	ENST00000518885	DDX31	Q9H8H2	851 aa	Known RBP	22.55	■■□□□ 1.2
CNOT7-204	ENST00000518885	TRIM45	Q9H8W5	580 aa	Predicted RBP	22.55	■■□□□ 1.2
CNOT7-204	ENST00000518885	KLHL1	Q9NR64	748 aa		22.55	■■□□□ 1.2
CNOT7-204	ENST00000518885	HECTD1	Q9ULT8	2610 aa		22.55	■■□□□ 1.2
CNOT7-204	ENST00000518885	LDB3	O75112	727 aa		22.54	■■□□□ 1.2
CNOT7-204	ENST00000518885	SLC25A12	O75746	678 aa		22.54	■■□□□ 1.2
CNOT7-204	ENST00000518885	ATP5F1	P24539	256 aa	Predicted RBP	22.54	■■□□□ 1.2
CNOT7-204	ENST00000518885	TRAF3	Q13114	568 aa		22.54	■■□□□ 1.2
CNOT7-204	ENST00000518885	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	22.54	■■□□□ 1.2
CNOT7-204	ENST00000518885	ZNF324B	Q6AW86	544 aa	Predicted RBP	22.54	■■□□□ 1.2
CNOT7-204	ENST00000518885	GPALPP1	Q8IXQ4	340 aa		22.54	■■□□□ 1.2
CNOT7-204	ENST00000518885	RNF175	Q8N4F7	328 aa		22.54	■■□□□ 1.2
CNOT7-204	ENST00000518885	AMER2	Q8N7J2	671 aa		22.54	■■□□□ 1.2
CNOT7-204	ENST00000518885	OR5L2	Q8NGL0	311 aa		22.54	■■□□□ 1.2
CNOT7-204	ENST00000518885	CCDC126	Q96EE4	140 aa		22.54	■■□□□ 1.2
CNOT7-204	ENST00000518885	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	22.54	■■□□□ 1.2
CNOT7-204	ENST00000518885	TBK1	Q9UHD2	729 aa		22.54	■■□□□ 1.2
CNOT7-204	ENST00000518885	TRPS1	Q9UHF7	1281 aa		22.54	■■□□□ 1.2
CNOT7-204	ENST00000518885	YARS2	Q9Y2Z4	477 aa	Known RBP	22.54	■■□□□ 1.2
CNOT7-204	ENST00000518885	CLDN16	Q9Y5I7	305 aa		22.54	■■□□□ 1.2
CNOT7-204	ENST00000518885	COL12A1	Q99715	3063 aa		22.54	■■□□□ 1.2
CNOT7-204	ENST00000518885	CCDC151	A5D8V7	595 aa		22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885	C17orf105	B2RV13	164 aa		22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885	TGFBR3L	H3BV60	316 aa		22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885	SEMA7A	O75326	666 aa		22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885	GUCY1B2	O75343	617 aa		22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885	NEURL1	O76050	574 aa		22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885	FAM58BP	P0C7Q3	252 aa		22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885	STT3A	P46977	705 aa		22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885	SSR4	P51571	173 aa		22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885	NEK2	P51955	445 aa		22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885	ESPL1	Q14674	2120 aa		22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885	MAPKAPK3	Q16644	382 aa		22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885	GFRAL	Q6UXV0	394 aa		22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885	OR4F6	Q8NGB9	312 aa		22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885	OR8K3	Q8NH51	312 aa		22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885	MTFMT	Q96DP5	389 aa	Known RBP	22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885	NSUN5	Q96P11	429 aa	Known RBP	22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885	SORBS1	Q9BX66	1292 aa	Known RBP	22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885	ZBTB26	Q9HCK0	441 aa		22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885	SEC14L3	Q9UDX4	400 aa		22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885	ADAM29	Q9UKF5	820 aa		22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885	OSGIN2	Q9Y236	505 aa		22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885	KLF13	Q9Y2Y9	288 aa	Predicted RBP	22.53	■■□□□ 1.2
CNOT7-204	ENST00000518885		A0A0A6YYD5	115 aa		22.52	■■□□□ 1.2
CNOT7-204	ENST00000518885		A0A1B0GUH1	482 aa		22.52	■■□□□ 1.2
CNOT7-204	ENST00000518885	PROM1	O43490	865 aa		22.52	■■□□□ 1.2
CNOT7-204	ENST00000518885	MAN1A2	O60476	641 aa		22.52	■■□□□ 1.2
CNOT7-204	ENST00000518885	ITGA10	O75578	1167 aa		22.52	■■□□□ 1.2
CNOT7-204	ENST00000518885	SUPT7L	O94864	414 aa		22.52	■■□□□ 1.2
CNOT7-204	ENST00000518885	NR2F6	P10588	404 aa		22.52	■■□□□ 1.2
CNOT7-204	ENST00000518885	PYGB	P11216	843 aa		22.52	■■□□□ 1.2
CNOT7-204	ENST00000518885	GP1BB	P13224	206 aa		22.52	■■□□□ 1.2
CNOT7-204	ENST00000518885	BSG	P35613	385 aa		22.52	■■□□□ 1.2
CNOT7-204	ENST00000518885	GPR143	P51810	404 aa		22.52	■■□□□ 1.2
CNOT7-204	ENST00000518885	NAA20	P61599	178 aa		22.52	■■□□□ 1.2
CNOT7-204	ENST00000518885	RASA2	Q15283	850 aa		22.52	■■□□□ 1.2
CNOT7-204	ENST00000518885	GSPT2	Q8IYD1	628 aa	Known RBP	22.52	■■□□□ 1.2
CNOT7-204	ENST00000518885	POGLUT1	Q8NBL1	392 aa		22.52	■■□□□ 1.2
CNOT7-204	ENST00000518885	THAP3	Q8WTV1	239 aa	Predicted RBP	22.52	■■□□□ 1.2
CNOT7-204	ENST00000518885	PTPMT1	Q8WUK0	201 aa	Predicted RBP	22.52	■■□□□ 1.2
CNOT7-204	ENST00000518885	PSMG3-AS1	Q96PY0	264 aa		22.52	■■□□□ 1.2
CNOT7-204	ENST00000518885	OR8D2	Q9GZM6	311 aa		22.52	■■□□□ 1.2
CNOT7-204	ENST00000518885	BRF2	Q9HAW0	419 aa		22.52	■■□□□ 1.2
CNOT7-204	ENST00000518885	RYDEN	Q9NUL5	291 aa	Known RBP	22.52	■■□□□ 1.2
CNOT7-204	ENST00000518885	TMEM216	Q9P0N5	145 aa		22.52	■■□□□ 1.2
CNOT7-204	ENST00000518885	PTPN13	Q12923	2485 aa		22.51	■■□□□ 1.19
CNOT7-204	ENST00000518885	NME2P1	O60361	137 aa		22.51	■■□□□ 1.19
CNOT7-204	ENST00000518885	GLRA3	O75311	464 aa		22.51	■■□□□ 1.19
CNOT7-204	ENST00000518885	KRT6A	P02538	564 aa		22.51	■■□□□ 1.19
CNOT7-204	ENST00000518885	KRT6B	P04259	564 aa		22.51	■■□□□ 1.19
CNOT7-204	ENST00000518885	KRT15	P19012	456 aa		22.51	■■□□□ 1.19
CNOT7-204	ENST00000518885	IMPDH1	P20839	514 aa		22.51	■■□□□ 1.19
CNOT7-204	ENST00000518885	NME2	P22392	152 aa		22.51	■■□□□ 1.19
CNOT7-204	ENST00000518885	KRT6C	P48668	564 aa		22.51	■■□□□ 1.19
CNOT7-204	ENST00000518885	TDGF1P3	P51864	188 aa		22.51	■■□□□ 1.19
CNOT7-204	ENST00000518885	IGLV3-21	P80748	117 aa	Predicted RBP	22.51	■■□□□ 1.19
CNOT7-204	ENST00000518885	ALDH6A1	Q02252	535 aa	Known RBP	22.51	■■□□□ 1.19
CNOT7-204	ENST00000518885	CLC	Q05315	142 aa		22.51	■■□□□ 1.19
CNOT7-204	ENST00000518885	C4orf17	Q53FE4	359 aa		22.51	■■□□□ 1.19
CNOT7-204	ENST00000518885	KRTCAP3	Q53RY4	240 aa		22.51	■■□□□ 1.19
CNOT7-204	ENST00000518885	GALNTL5	Q7Z4T8	443 aa		22.51	■■□□□ 1.19
CNOT7-204	ENST00000518885	CYP4Z2P	Q8N1L4	340 aa		22.51	■■□□□ 1.19
CNOT7-204	ENST00000518885	TMEM151A	Q8N4L1	468 aa		22.51	■■□□□ 1.19
CNOT7-204	ENST00000518885	ANKRD9	Q96BM1	317 aa	Predicted RBP	22.51	■■□□□ 1.19
CNOT7-204	ENST00000518885	EPB41L4B	Q9H329	900 aa		22.51	■■□□□ 1.19

Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms