RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 VPS13AQ96RL7 3174 aa22.11■■□□□ 1.13
SLIT3-204ENST00000518140 DMDP11532 3685 aa22.11■■□□□ 1.13
SLIT3-204ENST00000518140 PROS1P07225 676 aa22.11■■□□□ 1.13
SLIT3-204ENST00000518140 MYF5P13349 255 aa22.11■■□□□ 1.13
SLIT3-204ENST00000518140 CDK9P50750 372 aaKnown RBP22.11■■□□□ 1.13
SLIT3-204ENST00000518140 RELAQ04206 551 aa22.11■■□□□ 1.13
SLIT3-204ENST00000518140 CSTF1Q05048 431 aaKnown RBP22.11■■□□□ 1.13
SLIT3-204ENST00000518140 SHBQ15464 509 aa22.11■■□□□ 1.13
SLIT3-204ENST00000518140 LYSMD4Q5XG99 296 aa22.11■■□□□ 1.13
SLIT3-204ENST00000518140 FAM92BQ6ZTR7 304 aa22.11■■□□□ 1.13
SLIT3-204ENST00000518140 EDAQ92838 391 aa22.11■■□□□ 1.13
SLIT3-204ENST00000518140 THAP11Q96EK4 314 aa22.11■■□□□ 1.13
SLIT3-204ENST00000518140 MAP3K3Q99759 626 aa22.11■■□□□ 1.13
SLIT3-204ENST00000518140 SLC29A1Q99808 456 aa22.11■■□□□ 1.13
SLIT3-204ENST00000518140 CIB1Q99828 191 aa22.11■■□□□ 1.13
SLIT3-204ENST00000518140 FAIM2Q9BWQ8 316 aa22.11■■□□□ 1.13
SLIT3-204ENST00000518140 EPS8L2Q9H6S3 715 aa22.11■■□□□ 1.13
SLIT3-204ENST00000518140 SLC35C2Q9NQQ7 365 aa22.11■■□□□ 1.13
SLIT3-204ENST00000518140 CES1P1Q9UKY3 287 aa22.11■■□□□ 1.13
SLIT3-204ENST00000518140 RETP07949 1114 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 SMIM18P0DKX4 95 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 BMP2P12643 396 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 ZNF26P17031 533 aaPredicted RBP22.1■■□□□ 1.13
SLIT3-204ENST00000518140 CDH3P22223 829 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 PPIBP23284 216 aaKnown RBP22.1■■□□□ 1.13
SLIT3-204ENST00000518140 FASP25445 335 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 CHI3L1P36222 383 aaPredicted RBP22.1■■□□□ 1.13
SLIT3-204ENST00000518140 CTSKP43235 329 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 TSFMP43897 325 aaKnown RBP22.1■■□□□ 1.13
SLIT3-204ENST00000518140 SH3BGRP55822 239 aaPredicted RBP22.1■■□□□ 1.13
SLIT3-204ENST00000518140 VSX2P58304 361 aaPredicted RBP22.1■■□□□ 1.13
SLIT3-204ENST00000518140 DUSP2Q05923 314 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 RUNX2Q13950 521 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 C14orf28Q4W4Y0 310 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 NKAIN2Q5VXU1 208 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 WDR5BQ86VZ2 330 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 TRIML2Q8N7C3 387 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 CAMKVQ8NCB2 501 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 OR52E4Q8NGH9 312 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 KLHL6Q8WZ60 621 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 RERGQ96A58 199 aaPredicted RBP22.1■■□□□ 1.13
SLIT3-204ENST00000518140 EME1Q96AY2 570 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 GLIPR2Q9H4G4 154 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 TNFRSF21O75509 655 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 ERAL1O75616 437 aaKnown RBP22.1■■□□□ 1.13
SLIT3-204ENST00000518140 FKBP9O95302 570 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 GIMD1P0DJR0 217 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 C8orf89P0DMQ9 161 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 OLR1P78380 273 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 TGM3Q08188 693 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 AVL9Q8NBF6 648 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 ZNF764Q96H86 408 aaPredicted RBP22.1■■□□□ 1.13
SLIT3-204ENST00000518140 UCK1Q9HA47 277 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 FSCN3Q9NQT6 498 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 KCMF1Q9P0J7 381 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 RNF215Q9Y6U7 377 aa22.1■■□□□ 1.13
SLIT3-204ENST00000518140 SPEGQ15772 3267 aa22.09■■□□□ 1.13
SLIT3-204ENST00000518140 ZNF860A6NHJ4 632 aa22.09■■□□□ 1.13
SLIT3-204ENST00000518140 SAC3D1A6NKF1 404 aa22.09■■□□□ 1.13
SLIT3-204ENST00000518140 LAMTOR5O43504 91 aa22.09■■□□□ 1.13
SLIT3-204ENST00000518140 UQCRC2P22695 453 aa22.09■■□□□ 1.13
SLIT3-204ENST00000518140 CAPZBP47756 277 aa22.09■■□□□ 1.13
SLIT3-204ENST00000518140 LSAMPQ13449 338 aa22.09■■□□□ 1.13
SLIT3-204ENST00000518140 SATL1Q86VE3 508 aa22.09■■□□□ 1.13
SLIT3-204ENST00000518140 ANKFN1Q8N957 763 aa22.09■■□□□ 1.13
SLIT3-204ENST00000518140 OR52N2Q8NGI0 321 aa22.09■■□□□ 1.13
SLIT3-204ENST00000518140 CNRIP1Q96F85 164 aaPredicted RBP22.09■■□□□ 1.13
SLIT3-204ENST00000518140 AMDHD1Q96NU7 426 aa22.09■■□□□ 1.13
SLIT3-204ENST00000518140 C1GALT1Q9NS00 363 aa22.09■■□□□ 1.13
SLIT3-204ENST00000518140 UBAP1Q9NZ09 502 aa22.09■■□□□ 1.13
SLIT3-204ENST00000518140 EHD3Q9NZN3 535 aa22.09■■□□□ 1.13
SLIT3-204ENST00000518140 RNF103-CHMP3A0A140T963 221 aa22.08■■□□□ 1.13
SLIT3-204ENST00000518140 LILRA5A6NI73 299 aa22.08■■□□□ 1.13
SLIT3-204ENST00000518140 ALPPL2P10696 532 aa22.08■■□□□ 1.13
SLIT3-204ENST00000518140 ALDH4A1P30038 563 aa22.08■■□□□ 1.13
SLIT3-204ENST00000518140 HSPA13P48723 471 aa22.08■■□□□ 1.13
SLIT3-204ENST00000518140 GFERP55789 205 aa22.08■■□□□ 1.13
SLIT3-204ENST00000518140 RPS26P62854 115 aaKnown RBP22.08■■□□□ 1.13
SLIT3-204ENST00000518140 LRRC23Q53EV4 343 aaPredicted RBP22.08■■□□□ 1.13
SLIT3-204ENST00000518140 PMS2CLQ68D20 193 aa22.08■■□□□ 1.13
SLIT3-204ENST00000518140 C19orf47Q8N9M1 422 aaKnown RBP22.08■■□□□ 1.13
SLIT3-204ENST00000518140 ZBED6CLQ96FA7 236 aaPredicted RBP22.08■■□□□ 1.13
SLIT3-204ENST00000518140 FAF1Q9UNN5 650 aaPredicted RBP22.08■■□□□ 1.13
SLIT3-204ENST00000518140 CORO2BQ9UQ03 480 aa22.08■■□□□ 1.13
SLIT3-204ENST00000518140 AP4B1Q9Y6B7 739 aa22.08■■□□□ 1.13
SLIT3-204ENST00000518140 PCDH15Q96QU1 1955 aa22.08■■□□□ 1.13
SLIT3-204ENST00000518140 CASC3O15234 703 aaKnown RBP22.08■■□□□ 1.12
SLIT3-204ENST00000518140 HRO43593 1189 aa22.08■■□□□ 1.12
SLIT3-204ENST00000518140 GCM2O75603 506 aaPredicted RBP22.08■■□□□ 1.12
SLIT3-204ENST00000518140 RAP2AP10114 183 aa22.08■■□□□ 1.12
SLIT3-204ENST00000518140 AQP1P29972 269 aa22.08■■□□□ 1.12
SLIT3-204ENST00000518140 KDELR2P33947 212 aa22.08■■□□□ 1.12
SLIT3-204ENST00000518140 FEN1P39748 380 aaKnown RBP22.08■■□□□ 1.12
SLIT3-204ENST00000518140 PPM1FP49593 454 aaPredicted RBP22.08■■□□□ 1.12
SLIT3-204ENST00000518140 CRYBA2P53672 197 aa22.08■■□□□ 1.12
SLIT3-204ENST00000518140 CHRNB3Q05901 458 aa22.08■■□□□ 1.12
SLIT3-204ENST00000518140 NRF1Q16656 503 aa22.08■■□□□ 1.12
SLIT3-204ENST00000518140 FAM98BQ52LJ0 330 aaKnown RBP22.08■■□□□ 1.12
SLIT3-204ENST00000518140 CCDC116Q8IYX3 515 aa22.08■■□□□ 1.12
SLIT3-204ENST00000518140 SDR16C5Q8N3Y7 309 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms