RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 RPS13P62277 151 aaKnown RBP11.79□□□□□ -0.52
PCM1-203ENST00000517545 MLLT11Q13015 90 aaPredicted RBP11.79□□□□□ -0.52
PCM1-203ENST00000517545 NCF4Q15080 339 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 PRSS53Q2L4Q9 553 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 ATAT1Q5SQI0 421 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 DDI2Q5TDH0 399 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 TMEM173Q86WV6 379 aaPredicted RBP11.79□□□□□ -0.52
PCM1-203ENST00000517545 UPRTQ96BW1 309 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 PLD4Q96BZ4 506 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 ALG14Q96F25 216 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 ASIC4Q96FT7 647 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 TM9SF2Q99805 663 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 WRAP53Q9BUR4 548 aaKnown RBP11.79□□□□□ -0.52
PCM1-203ENST00000517545 MCUBQ9NWR8 336 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 KPNA5O15131 536 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 OR2B3O76000 313 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 IL1AP01583 271 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 OSMP13725 252 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 PCSK2P16519 638 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 LHCGRP22888 699 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 CHI3L1P36222 383 aaPredicted RBP11.79□□□□□ -0.52
PCM1-203ENST00000517545 ETV5P41161 510 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 ETV1P50549 477 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 SNRPGP62308 76 aaKnown RBP11.79□□□□□ -0.52
PCM1-203ENST00000517545 RPS25P62851 125 aaKnown RBP11.79□□□□□ -0.52
PCM1-203ENST00000517545 CRB2Q5IJ48 1285 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 OR2G6Q5TZ20 316 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 PROKR2Q8NFJ6 384 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 OR7G3Q8NG95 312 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 OR52P1PQ8NH57 321 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 KATNB1Q9BVA0 655 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 B3GAT2Q9NPZ5 323 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 TEKT2Q9UIF3 430 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 KLHL21Q9UJP4 597 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 SPIN1Q9Y657 262 aaPredicted RBP11.79□□□□□ -0.52
PCM1-203ENST00000517545 TMEM202A6NGA9 273 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 ARHGEF9O43307 516 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 IFNW1P05000 195 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 TIA1P31483 386 aaKnown RBP eCLIP11.79□□□□□ -0.52
PCM1-203ENST00000517545 SOAT1P35610 550 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 RPS26P62854 115 aaKnown RBP11.79□□□□□ -0.52
PCM1-203ENST00000517545 PTSQ03393 145 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 TNK1Q13470 666 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 CDH18Q13634 790 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 LCN1P1Q5VSP4 162 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 MEDAGQ5VYS4 303 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 PLCZ1Q86YW0 608 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 LIX1LQ8IVB5 337 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 LMNTD1Q8N9Z9 388 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 TMEM245Q9H330 911 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 TVP23BQ9NYZ1 205 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 MAT2BQ9NZL9 334 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 ENOPH1Q9UHY7 261 aa11.79□□□□□ -0.52
PCM1-203ENST00000517545 ARHGEF33A8MVX0 844 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 OR10H3O60404 316 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 C1QBP02746 253 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 SLC2A2P11168 524 aaPredicted RBP11.78□□□□□ -0.52
PCM1-203ENST00000517545 EVI2BP34910 448 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 PCBP3P57721 371 aaKnown RBP11.78□□□□□ -0.52
PCM1-203ENST00000517545 CYP4F8P98187 520 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 FCHO2Q0JRZ9 810 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 RBM45Q8IUH3 476 aaKnown RBP11.78□□□□□ -0.52
PCM1-203ENST00000517545 MMP21Q8N119 569 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 CBARPQ8N350 705 aaPredicted RBP11.78□□□□□ -0.52
PCM1-203ENST00000517545 Q8N402 240 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 CLDN22Q8N7P3 220 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 C1GALT1C1Q96EU7 318 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 WFDC6Q9BQY6 131 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 TMEM38AQ9H6F2 299 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 RC3H2Q9HBD1 1191 aaKnown RBP11.78□□□□□ -0.52
PCM1-203ENST00000517545 SLC23A1Q9UHI7 598 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 RPL36Q9Y3U8 105 aaKnown RBP11.78□□□□□ -0.52
PCM1-203ENST00000517545 RFXAPO00287 272 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 TLX2O43763 284 aaPredicted RBP11.78□□□□□ -0.52
PCM1-203ENST00000517545 PRKYO43930 277 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 LGI1O95970 557 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 TNNI3P19429 210 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 SLC9A3P48764 834 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 XKP51811 444 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 ATN1P54259 1190 aaPredicted RBP11.78□□□□□ -0.52
PCM1-203ENST00000517545 RBBP4Q09028 425 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 LRRC74AQ0VAA2 488 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 C1DQ13901 141 aaKnown RBP11.78□□□□□ -0.52
PCM1-203ENST00000517545 ZNF628Q5EBL2 1059 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 CASP12Q6UXS9 341 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 SLC24A5Q71RS6 500 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 HS6ST3Q8IZP7 471 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 NATD1Q8N6N6 113 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 TM9SF4Q92544 642 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 COQ7Q99807 217 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 ARHGAP39Q9C0H5 1083 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 RACGAP1Q9H0H5 632 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 BRD9Q9H8M2 597 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 GALNT9Q9HCQ5 603 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 MARCH5Q9NX47 278 aa11.78□□□□□ -0.52
PCM1-203ENST00000517545 LOC102723532A0A0G2JNH3 316 aa11.77□□□□□ -0.52
PCM1-203ENST00000517545 H0YIV9 168 aa11.77□□□□□ -0.52
PCM1-203ENST00000517545 TSC22D2O75157 780 aa11.77□□□□□ -0.52
PCM1-203ENST00000517545 ZNF821O75541 412 aaPredicted RBP11.77□□□□□ -0.52
PCM1-203ENST00000517545 POU3F3P20264 500 aaPredicted RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms