RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 CSHL1Q14406 222 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 RBBP5Q15291 538 aaKnown RBP9.62□□□□□ -0.87
CLDND1-231ENST00000515620 SF3B4Q15427 424 aaKnown RBP eCLIP9.62□□□□□ -0.87
CLDND1-231ENST00000515620 SPA17Q15506 151 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 ZNF791Q3KP31 576 aaPredicted RBP9.62□□□□□ -0.87
CLDND1-231ENST00000515620 BBS9Q3SYG4 887 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 C10orf62Q5T681 223 aaPredicted RBP9.62□□□□□ -0.87
CLDND1-231ENST00000515620 HEPHL1Q6MZM0 1159 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 C20orf204Q6ZNR8 217 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 DENND6AQ8IWF6 608 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 PALM2Q8IXS6 379 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 ZNF595Q8IYB9 648 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 UBL4BQ8N7F7 174 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 C9orf106Q8NAJ2 232 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 MAPK1IP1LQ8NDC0 245 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 TRPV3Q8NET8 790 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 OR8K3Q8NH51 312 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 OR14A16Q8NHC5 309 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 SLC22A8Q8TCC7 542 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 PAQR8Q8TEZ7 354 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 SLC5A11Q8WWX8 675 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 SPACA9Q96E40 222 aaPredicted RBP9.62□□□□□ -0.87
CLDND1-231ENST00000515620 PIK3IP1Q96FE7 263 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 SMIM10Q96HG1 83 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 FAR2Q96K12 515 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 CSF3RQ99062 836 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 PARVBQ9HBI1 364 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 PROK2Q9HC23 129 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 EIF2B3Q9NR50 452 aaKnown RBP9.62□□□□□ -0.87
CLDND1-231ENST00000515620 PAK5Q9P286 719 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 NDRG3Q9UGV2 375 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 SOX13Q9UN79 622 aa9.62□□□□□ -0.87
CLDND1-231ENST00000515620 MRPS33Q9Y291 106 aaKnown RBP9.62□□□□□ -0.87
CLDND1-231ENST00000515620 SYCE3A1L190 88 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 GRID2IPA4D2P6 1211 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 AKR1B15C9JRZ8 316 aaPredicted RBP9.61□□□□□ -0.87
CLDND1-231ENST00000515620 EIF3FO00303 357 aaPredicted RBP9.61□□□□□ -0.87
CLDND1-231ENST00000515620 CTIFO43310 598 aaKnown RBP9.61□□□□□ -0.87
CLDND1-231ENST00000515620 CBFA2T2O43439 604 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 TRAPPC6AO75865 159 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 SERPINA6P08185 405 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 PAMP19021 973 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 TNNI3P19429 210 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 NR1H2P55055 460 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 SP140Q13342 867 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 TNK1Q13470 666 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 MPEG1Q2M385 716 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 PIGGQ5H8A4 983 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 DCST1Q5T197 706 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 VASNQ6EMK4 673 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 PEX26Q7Z412 305 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 TMPRSS11BQ86T26 416 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 LRRC57Q8N9N7 239 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 OR10G3Q8NGC4 313 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 OR56A3Q8NH54 315 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 GABPB2Q8TAK5 448 aaPredicted RBP9.61□□□□□ -0.87
CLDND1-231ENST00000515620 EEF1AKMT1Q8WVE0 214 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 C1orf54Q8WWF1 131 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 GAL3ST3Q96A11 431 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 ZNF597Q96LX8 424 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 PIGQQ9BRB3 760 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 DOHHQ9BU89 302 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 SFXN3Q9BWM7 321 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 ALOXE3Q9BYJ1 711 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 ARL15Q9NXU5 204 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 COPS7AQ9UBW8 275 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 ADGRE2Q9UHX3 823 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 TRMT6Q9UJA5 497 aaKnown RBP9.61□□□□□ -0.87
CLDND1-231ENST00000515620 AMFRQ9UKV5 643 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 SLC6A5Q9Y345 797 aa9.61□□□□□ -0.87
CLDND1-231ENST00000515620 CUBNO60494 3623 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 SYNDIG1LA6NDD5 238 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 PABPN1LA6NDY0 278 aaKnown RBP9.6□□□□□ -0.87
CLDND1-231ENST00000515620 AP3B1O00203 1094 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 ERI3O43414 337 aaKnown RBP9.6□□□□□ -0.87
CLDND1-231ENST00000515620 B3GALT2O43825 422 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 ETHE1O95571 254 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 HIST1H2AGP0C0S8 130 aaPredicted RBP9.6□□□□□ -0.87
CLDND1-231ENST00000515620 HIST1H2ADP20671 130 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 CERS1P27544 350 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 HNRNPH1P31943 449 aaKnown RBP9.6□□□□□ -0.87
CLDND1-231ENST00000515620 SLC1A2P43004 574 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 RGS4P49798 205 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 STXBP1P61764 594 aaKnown RBP9.6□□□□□ -0.87
CLDND1-231ENST00000515620 TBL3Q12788 808 aaKnown RBP9.6□□□□□ -0.87
CLDND1-231ENST00000515620 STX4Q12846 297 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 THOC5Q13769 683 aaKnown RBP9.6□□□□□ -0.87
CLDND1-231ENST00000515620 RCAN2Q14206 197 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 DUPD1Q68J44 220 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 LRRC8EQ6NSJ5 796 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 CASC4Q6P4E1 433 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 LYPD8Q6UX82 237 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 SYDE1Q6ZW31 735 aaPredicted RBP9.6□□□□□ -0.87
CLDND1-231ENST00000515620 C9orf40Q8IXQ3 194 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 MYO1HQ8N1T3 1032 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 ZNF441Q8N8Z8 693 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 CCT6BQ92526 530 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 NTNG2Q96CW9 530 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 WDYHV1Q96HA8 205 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 HIST1H2AHQ96KK5 128 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms