RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	TMCO5B	A8MYB1	307 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	C19orf81	C9J6K1	198 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	SLC30A4	O14863	429 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	WDR46	O15213	610 aa	Known RBP	3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	SELENOF	O60613	162 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	TBCA	O75347	108 aa	Known RBP	3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	TGDS	O95455	350 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	FHIT	P49789	147 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	RPS27A	P62979	156 aa	Known RBP	3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	ITPK1	Q13572	414 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	TIMM50	Q3ZCQ8	353 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	TTC31	Q49AM3	519 aa	Predicted RBP	3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	MARC1	Q5VT66	337 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	NEPRO	Q6NW34	567 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	PAMR1	Q6UXH9	720 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	ZNF600	Q6ZNG1	722 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	VASH2	Q86V25	355 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	C11orf42	Q8N5U0	333 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	MGARP	Q8TDB4	240 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	SEPT8	Q92599	483 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	TBC1D31	Q96DN5	1066 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	C17orf62	Q9BQA9	187 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	EDEM3	Q9BZQ6	932 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	SLC39A8	Q9C0K1	460 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	ZBP1	Q9H171	429 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	MINDY3	Q9H8M7	445 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	ZNF346	Q9UL40	294 aa	Known RBP	3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	COL16A1	Q07092	1604 aa	Predicted RBP	3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	TEX48	A0A1B0GUV7	120 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	OR5H15	A6NDH6	313 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	ZNF724	A8MTY0	619 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	FAM220BP	B1ANY3	271 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	ZNF253	O75346	499 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	ATP6V1B1	P15313	513 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	ATP6V1E1	P36543	226 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	GP5	P40197	560 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	BRCC3	P46736	316 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	BPIFB3	P59826	476 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	IGLV3-21	P80748	117 aa	Predicted RBP	3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	SLC3A1	Q07837	685 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	PKN2	Q16513	984 aa	Known RBP	3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	CASC4	Q6P4E1	433 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	ALKBH5	Q6P6C2	394 aa	Known RBP	3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	RFWD3	Q6PCD5	774 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	METTL23	Q86XA0	190 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	THNSL1	Q8IYQ7	743 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	OR8H3	Q8N146	312 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402		Q8NFD4	153 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	OR6T1	Q8NGN1	323 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	FAM162A	Q96A26	154 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	BSCL2	Q96G97	398 aa	Predicted RBP	3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	RBM18	Q96H35	190 aa	Known RBP	3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	GBP5	Q96PP8	586 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	YTHDF1	Q9BYJ9	559 aa	Known RBP	3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	LSG1	Q9H089	658 aa	Known RBP	3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	ZNF319	Q9P2F9	582 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	GMEB2	Q9UKD1	530 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	GPR132	Q9UNW8	380 aa		3.02	□□□□□ -1.93
MATR3-223	ENST00000514402	CCDC162P	A2VCL2	907 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402		M0R296	226 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	SLC7A4	O43246	635 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	SRPX2	O60687	465 aa	Predicted RBP	3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	CSDE1	O75534	798 aa	Known RBP	3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	BAG2	O95816	211 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	PIGR	P01833	764 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	RLN1	P04808	185 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	UMPS	P11172	480 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	SCG2	P13521	617 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	PRG2	P13727	222 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	CAST	P20810	708 aa	Known RBP	3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	DRD3	P35462	400 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	FOLH1	Q04609	750 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	MFGE8	Q08431	387 aa	Predicted RBP	3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	IQCC	Q4KMZ1	466 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	PM20D1	Q6GTS8	502 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	TRAT1	Q6PIZ9	186 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	CACUL1	Q86Y37	369 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	SAMD12	Q8N8I0	201 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	NAT8L	Q8N9F0	302 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	ZNRF1	Q8ND25	227 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	OR8H1	Q8NGG4	311 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	BAD	Q92934	168 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	ZNF274	Q96GC6	653 aa	Predicted RBP	3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	RASL10B	Q96S79	203 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	INTS14	Q96SY0	518 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	LIME1	Q9H400	295 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	AMBN	Q9NP70	447 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	MRPL17	Q9NRX2	175 aa	Known RBP	3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	DHRS4-AS1	Q9P1J3	65 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	MTRR	Q9UBK8	725 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	ITGA11	Q9UKX5	1188 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	SH3GLB1	Q9Y371	365 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	FBXO7	Q9Y3I1	522 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	ABCC9	O60706	1549 aa		3.01	□□□□□ -1.93
MATR3-223	ENST00000514402	ZNF487	B1APH4	448 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402		H0Y626	953 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402	HTATSF1	O43719	755 aa	Known RBP	3	□□□□□ -1.93
MATR3-223	ENST00000514402	RAD51D	O75771	328 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402	LETM1	O95202	739 aa	Predicted RBP	3	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms