RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 SLC12A2P55011 1212 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 PLTPP55058 493 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 GPR85P60893 370 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 ATP6V0D1P61421 351 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 RNF4P78317 190 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 PCDH1Q08174 1060 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 E2F2Q14209 437 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 OR4D1Q15615 310 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 SLC25A35Q3KQZ1 300 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 PIGGQ5H8A4 983 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 B3GNT6Q6ZMB0 384 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 TRILQ7L0X0 811 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 OR5M3Q8NGP4 307 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 NUBPLQ8TB37 319 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 FBXO25Q8TCJ0 367 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 CCT6BQ92526 530 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 TSPAN17Q96FV3 270 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 UBXN10Q96LJ8 280 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 SMC6Q96SB8 1091 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 TTYH2Q9BSA4 534 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 TTTY12Q9BZ98 90 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 UCK2Q9BZX2 261 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 PHACTR1Q9C0D0 580 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 COPS7BQ9H9Q2 264 aaPredicted RBP11.65□□□□□ -0.54
VEGFA-216ENST00000512683 PRDM7Q9NQW5 492 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 SACM1LQ9NTJ5 587 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 DEPPQ9NTK1 212 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 MS4A12Q9NXJ0 267 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 QPCTLQ9NXS2 382 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 COPS7AQ9UBW8 275 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 ADGRE2Q9UHX3 823 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 ZNF490Q9ULM2 529 aaPredicted RBP11.65□□□□□ -0.54
VEGFA-216ENST00000512683 ZFHX3Q15911 3703 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 NCF1BA6NI72 391 aaPredicted RBP11.64□□□□□ -0.55
VEGFA-216ENST00000512683 NCF1CA8MVU1 366 aaPredicted RBP11.64□□□□□ -0.55
VEGFA-216ENST00000512683 ZNHIT1O43257 154 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 PRKNO60260 465 aaPredicted RBP11.64□□□□□ -0.55
VEGFA-216ENST00000512683 PRAMEF4O60810 478 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 FAM155BO75949 473 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 TBX6O95947 436 aaPredicted RBP11.64□□□□□ -0.55
VEGFA-216ENST00000512683 P04436 131 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 GSTA2P09210 222 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 COX7A2P14406 83 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 NCF1P14598 390 aaPredicted RBP11.64□□□□□ -0.55
VEGFA-216ENST00000512683 CD1DP15813 335 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 GP5P40197 560 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 RFC3P40938 356 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 SOX3P41225 446 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 MAGEA4P43358 317 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 HK2P52789 917 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 ARFIP1P53367 373 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 NUP107P57740 925 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 GUCY2DQ02846 1103 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 ZKSCAN8Q15776 578 aaPredicted RBP11.64□□□□□ -0.55
VEGFA-216ENST00000512683 KBTBD12Q3ZCT8 623 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 WLSQ5T9L3 541 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 PRAMEF9Q5VWM5 478 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 CHSY3Q70JA7 882 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 GPSM1Q86YR5 675 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 CDKL2Q92772 493 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 ART5Q96L15 291 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 FOXC2Q99958 501 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 TMEM79Q9BSE2 394 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.64□□□□□ -0.552e-14■■□□□ 13.3
VEGFA-216ENST00000512683 B4GALT7Q9UBV7 327 aa11.64□□□□□ -0.55
VEGFA-216ENST00000512683 UTP11Q9Y3A2 253 aaKnown RBP11.64□□□□□ -0.55
VEGFA-216ENST00000512683 DCHS2Q6V1P9 2916 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 TGFBR3LH3BV60 316 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 WWP2O00308 870 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 SCELO95171 688 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 STMN1P16949 149 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 PPP2R1BP30154 601 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 MAN2A2P49641 1150 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 RAB10P61026 200 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 CAV1Q03135 178 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 FOLH1Q04609 750 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 FOXO1Q12778 655 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 SF3B4Q15427 424 aaKnown RBP eCLIP11.63□□□□□ -0.554e-10■■■■□ 22.2
VEGFA-216ENST00000512683 AP5B1Q2VPB7 878 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 ZNF750Q32MQ0 723 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 FBXO48Q5FWF7 155 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 RIPPLY2Q5TAB7 128 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 SLC22A10Q63ZE4 541 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 FAM47EQ6ZV65 393 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 VN1R5Q7Z5H4 357 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 CCDC25Q86WR0 208 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 CCDC71Q8IV32 467 aaPredicted RBP11.63□□□□□ -0.55
VEGFA-216ENST00000512683 TMEM251Q8N6I4 163 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 ACOT4Q8N9L9 421 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 FAM47BQ8NA70 645 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 TMEM52Q8NDY8 209 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 CHDHQ8NE62 594 aaPredicted RBP11.63□□□□□ -0.55
VEGFA-216ENST00000512683 OR10Q1Q8NGQ4 319 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 TANKQ92844 425 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 ESAMQ96AP7 390 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 LRRC46Q96FV0 321 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 RBM18Q96H35 190 aaKnown RBP11.63□□□□□ -0.55
VEGFA-216ENST00000512683 SCYL1Q96KG9 808 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 OR8D2Q9GZM6 311 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 RAB17Q9H0T7 212 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms