RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 MBD3L3A6NE82 208 aaPredicted RBP8.36□□□□□ -1.07
NUP54-211ENST00000512151 ERI2A8K979 691 aaKnown RBP8.36□□□□□ -1.07
NUP54-211ENST00000512151 E7ENX8 843 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 SMAPO00193 183 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 GALR3O60755 368 aaPredicted RBP8.36□□□□□ -1.07
NUP54-211ENST00000512151 CCNDBP1O95273 360 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 MATN4O95460 622 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 IL18BPO95998 194 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 CRYGSP22914 178 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 CFPP27918 469 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 MAGEA3P43357 314 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 CRADDP78560 199 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 TAP2Q03519 686 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 MORF4L2Q15014 288 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 C6orf52Q5T4I8 152 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 RNF187Q5TA31 235 aaPredicted RBP8.36□□□□□ -1.07
NUP54-211ENST00000512151 PLEKHM3Q6ZWE6 761 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.36□□□□□ -1.07
NUP54-211ENST00000512151 MPP5Q8N3R9 675 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 ZNF740Q8NDX6 193 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 MBD3L2Q8NHZ7 208 aaPredicted RBP8.36□□□□□ -1.07
NUP54-211ENST00000512151 FBXO25Q8TCJ0 367 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 ZNF480Q8WV37 535 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 HSPBAP1Q96EW2 488 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 VMP1Q96GC9 406 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 SIGLEC10Q96LC7 697 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 PPP1R2P1Q96PQ5 205 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 TRIB1Q96RU8 372 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 TIMP4Q99727 224 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 PROK2Q9HC23 129 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 SH2D2AQ9NP31 389 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 SACM1LQ9NTJ5 587 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 UTP6Q9NYH9 597 aaKnown RBP8.36□□□□□ -1.07
NUP54-211ENST00000512151 ZFATQ9P243 1243 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 MARCH4Q9P2E8 410 aaPredicted RBP8.36□□□□□ -1.07
NUP54-211ENST00000512151 MYOTQ9UBF9 498 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 CLDN16Q9Y5I7 305 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 SLC22A7Q9Y694 548 aa8.36□□□□□ -1.07
NUP54-211ENST00000512151 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.36□□□□□ -1.07
NUP54-211ENST00000512151 C15orf38-AP3S2A0A0A6YYH1 394 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 CD8B2A6NJW9 211 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 ZFAND5O76080 213 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 SLC16A8O95907 504 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 JAK1P23458 1154 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 MGAT1P26572 445 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 MC3RP41968 323 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 SLCO1A2P46721 670 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 HK2P52789 917 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 PLTPP55058 493 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 SESN2P58004 480 aaPredicted RBP8.35□□□□□ -1.07
NUP54-211ENST00000512151 RPS15AP62244 130 aaKnown RBP8.35□□□□□ -1.07
NUP54-211ENST00000512151 ABATP80404 500 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 CDK16Q00536 496 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 DHX9Q08211 1270 aaKnown RBP8.35□□□□□ -1.07
NUP54-211ENST00000512151 FAM27E3Q08E93 113 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 CDH17Q12864 832 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 DUSP8Q13202 625 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 GBX1Q14549 363 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 DEFB134Q4QY38 66 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 ANKRD20A4Q4UJ75 823 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 PDLIM3Q53GG5 364 aaPredicted RBP8.35□□□□□ -1.07
NUP54-211ENST00000512151 DCST1Q5T197 706 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 WDR93Q6P2C0 686 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 PPP1R21Q6ZMI0 780 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 C22orf34Q6ZV56 151 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 LINC00523Q86TU6 105 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 ASPGQ86U10 573 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 IGDCC3Q8IVU1 814 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 BBOF1Q8ND07 529 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 SLC22A8Q8TCC7 542 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 TMEM171Q8WVE6 324 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 SLC44A1Q8WWI5 657 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 IFT81Q8WYA0 676 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 ZNF778Q96MU6 729 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 TSSK1BQ9BXA7 367 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 ADAM19Q9H013 955 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 P2RY12Q9H244 342 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 ACKR4Q9NPB9 350 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 PRDM9Q9NQV7 894 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 PNO1Q9NRX1 252 aaKnown RBP8.35□□□□□ -1.07
NUP54-211ENST00000512151 FAM114A2Q9NRY5 505 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 SYBUQ9NX95 663 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 NDRG3Q9UGV2 375 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 YLPM1P49750 1951 aaKnown RBP8.35□□□□□ -1.07
NUP54-211ENST00000512151 FREM1Q5H8C1 2179 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 PRR14LQ5THK1 2151 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 F8W8V4 182 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 ERN1O75460 977 aaKnown RBP8.35□□□□□ -1.07
NUP54-211ENST00000512151 ERLIN1O75477 346 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 P04436 131 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 TMIGD3P0DMS9 266 aaPredicted RBP8.35□□□□□ -1.07
NUP54-211ENST00000512151 MLNP12872 115 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 CCKARP32238 428 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 THBS2P35442 1172 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 CPA2P48052 419 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 NPY2RP49146 381 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 CBX1P83916 185 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 MEF2AQ02078 507 aaPredicted RBP8.35□□□□□ -1.07
NUP54-211ENST00000512151 ARHGAP19Q14CB8 494 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 FASTKD3Q14CZ7 662 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms