RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 TAAR2Q9P1P5 351 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 NFKBIL1Q9UBC1 381 aaPredicted RBP3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 FAF1Q9UNN5 650 aaPredicted RBP3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 HES2Q9Y543 173 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 SLCO1B1Q9Y6L6 691 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 MEGF8Q7Z7M0 2845 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 CROCCQ5TZA2 2017 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 TDRD15B5MCY1 1934 aaKnown RBP3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 TRBC2A0A5B9 178 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 ANKUB1A6NFN9 424 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 ZBTB5O15062 677 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 NVLO15381 856 aaKnown RBP3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 FGF17O60258 216 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 PRKNO60260 465 aaPredicted RBP3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 LMX1BO60663 402 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 DKC1O60832 514 aaKnown RBP eCLIP3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 ZG16O60844 167 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 B3GAT3O94766 335 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 ERLIN2O94905 339 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 IGLV3-19P01714 112 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 H1F0P07305 194 aaKnown RBP3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 SP1P08047 785 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 LINGO3P0C6S8 592 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 DANCRP0C864 163 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 PAX1P15863 534 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 CBLP22681 906 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 DNASE1P24855 282 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 CD27P26842 260 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 NR2C2P49116 596 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 TPMTP51580 245 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 TLE4Q04727 773 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 PLA2G7Q13093 441 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 MFAP5Q13361 173 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 ZNF77Q15935 545 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 TCP11X2Q5H9J9 407 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 RNASEH2BQ5TBB1 312 aaKnown RBP3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 NOTUMQ6P988 496 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 FAM198BQ6UWH4 519 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 LINGO4Q6UY18 593 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 TRMT1LQ7Z2T5 733 aaKnown RBP3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 CAMKMTQ7Z624 323 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 DNAJB7Q7Z6W7 309 aaPredicted RBP3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 GPALPP1Q8IXQ4 340 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 ZNF595Q8IYB9 648 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 TC2NQ8N9U0 490 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 ZFAND2BQ8WV99 257 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 MTERF3Q96E29 417 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 ALG14Q96F25 216 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 C18orf12Q96KH6 178 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 NODALQ96S42 347 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 EPYCQ99645 322 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 ABHD6Q9BV23 337 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 NAPBQ9H115 298 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 OR10A4Q9H209 315 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 NXF3Q9H4D5 531 aaKnown RBP3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 RABEP2Q9H5N1 569 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 TFB2MQ9H5Q4 396 aaKnown RBP3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 VAT1LQ9HCJ6 419 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 EQTNQ9NQ60 294 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 SLC38A7Q9NVC3 462 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 C5AR2Q9P296 337 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 WDR35Q9P2L0 1181 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 NME7Q9Y5B8 376 aa3.24□□□□□ -1.89
TOPBP1-208ENST00000511439 FEZF1A0PJY2 475 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 A8MXE2 369 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 PRR32B1ATL7 298 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 OR10H2O60403 315 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 TACC2O95359 2948 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 TRUB2O95900 331 aaKnown RBP3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 MYBL1P10243 752 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 PRKAR1AP10644 381 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 ALPPL2P10696 532 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 ACP2P11117 423 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 EEF1DP29692 281 aaKnown RBP3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 UGT1A5P35504 534 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 THOP1P52888 689 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 CDC20Q12834 499 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 DMP1Q13316 513 aaPredicted RBP3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 DRP2Q13474 957 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 PSMD6Q15008 389 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 PRR30Q53SZ7 412 aaPredicted RBP3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 C6orf163Q5TEZ5 329 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 ANO5Q75V66 913 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 MARK2Q7KZI7 788 aaKnown RBP3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 CRYBG2Q8N1P7 616 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 OR4C6Q8NH72 309 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 ZNF473Q8WTR7 871 aaKnown RBP3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 TEKT4Q8WW24 435 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 BIRC7Q96CA5 298 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 LINC00615Q96LM1 132 aaPredicted RBP3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 CFAP57Q96MR6 1250 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 UHRF2Q96PU4 802 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 GABRG3Q99928 467 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 BAG1Q99933 345 aaPredicted RBP3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 BTBD10Q9BSF8 475 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 STRADBQ9C0K7 418 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 WNT5BQ9H1J7 359 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 DPAGT1Q9H3H5 408 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 OPA3Q9H6K4 179 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 NOL11Q9H8H0 719 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms