RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 SFT2D3Q587I9 215 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 SLC25A25Q6KCM7 469 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 PLEKHM3Q6ZWE6 761 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 BNIPLQ7Z465 357 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 ZNF555Q8NEP9 628 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 OR2Y1Q8NGV0 311 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 TWIST2Q8WVJ9 160 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 MTFMTQ96DP5 389 aaKnown RBP9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 HS6ST2Q96MM7 605 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 TRAPPC9Q96Q05 1148 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 PIGQQ9BRB3 760 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 MKS1Q9NXB0 559 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 SEC14L3Q9UDX4 400 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 PDE10AQ9Y233 779 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 REXO2Q9Y3B8 237 aaKnown RBP9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 B4GAT1O43505 415 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 DDAH2O95865 285 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 BPGMP07738 259 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 ADRB1P08588 477 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 BCL6P41182 706 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 FADDQ13158 208 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 ZNF789Q5FWF6 425 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 FAM69BQ5VUD6 431 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 PEAR1Q5VY43 1037 aaPredicted RBP9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 ZCCHC7Q8N3Z6 543 aaKnown RBP9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 PDPRQ8NCN5 879 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 TTC9Q92623 222 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 CRELD1Q96HD1 420 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 FNDC11Q9BVV2 318 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 FARSBQ9NSD9 589 aaKnown RBP9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 OLAHQ9NV23 265 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 SAMD4AQ9UPU9 718 aaKnown RBP9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 KLHL20Q9Y2M5 609 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 PLLPQ9Y342 182 aa9.18□□□□□ -0.94
POLR2J3-215ENST00000511313 OR2T1O43869 369 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 SLC35E2BP0CK96 405 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 SLC35E2P0CK97 266 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 MMP11P24347 488 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 GK3PQ14409 553 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 RPTNQ6XPR3 784 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 SPRED2Q7Z698 418 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 PHTF2Q8N3S3 785 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 ALG2Q9H553 416 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 ARNTLO00327 626 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 TGFB1P01137 390 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 NQO1P15559 274 aaKnown RBP9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 RPS13P62277 151 aaKnown RBP9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 VLDLRP98155 873 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 GAB1Q13480 694 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 LIN52Q52LA3 116 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 LARP4Q71RC2 724 aaKnown RBP eCLIP9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 NET1Q7Z628 596 aaPredicted RBP9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 LDB1Q86U70 411 aaPredicted RBP9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 SLC34A3Q8N130 599 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 OR5M3Q8NGP4 307 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 OR1N1Q8NGS0 311 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 NT5CQ8TCD5 201 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 EFHD2Q96C19 240 aaPredicted RBP9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 ZFP3Q96NJ6 502 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 SCNM1Q9BWG6 230 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 KRT84Q9NSB2 600 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 PTPRZ1P23471 2315 aaPredicted RBP9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 OR51F1A6NGY5 319 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 SRRM3A6NNA2 597 aaPredicted RBP9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 HNRNPCL2B2RXH8 293 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 BTN3A3O00478 584 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 SNRPB2P08579 225 aaKnown RBP9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 IL7RP16871 459 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 GDF1P27539 372 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 KCTD16Q68DU8 428 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 PROSER1Q86XN7 944 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 ST13P4Q8IZP2 240 aaPredicted RBP9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 C1orf52Q8N6N3 182 aaKnown RBP9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 NETO2Q8NC67 525 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 CAPSLQ8WWF8 208 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 SLC38A4Q969I6 547 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 MS4A4EQ96PG1 132 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 SLC38A2Q96QD8 506 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 HIST1H2AAQ96QV6 131 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 KLF6Q99612 283 aaPredicted RBP9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 CHST11Q9NPF2 352 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 GLRX2Q9NS18 164 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 MYH10P35580 1976 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 A0A0A6YYC8 382 aaPredicted RBP9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 I3L1I5 382 aaPredicted RBP9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 HYAL3O43820 417 aaPredicted RBP9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 PLIN3O60664 434 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 IL33O95760 270 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 BLVRAP53004 296 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 SHC2P98077 582 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 EMX2Q04743 252 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 SLC10A1Q14973 349 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 BEND6Q5SZJ8 279 aaPredicted RBP9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 LCN1P1Q5VSP4 162 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 TMPPEQ6ZT21 453 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 ZNF683Q8IZ20 524 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 RFWD2Q8NHY2 731 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 TMBIM4Q9HC24 238 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 FAIMQ9NVQ4 179 aa9.17□□□□□ -0.94
POLR2J3-215ENST00000511313 EIF3KQ9UBQ5 218 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms