RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 ZNF791Q3KP31 576 aaPredicted RBP12.34□□□□□ -0.43
DDX41-210ENST00000509576 HSDL2Q6YN16 418 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 RTL4Q6ZR62 310 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 GPALPP1Q8IXQ4 340 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 ZZZ3Q8IYH5 903 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 EID3Q8N140 333 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 FAM109AQ8N4B1 249 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 MORN4Q8NDC4 146 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 GRK7Q8WTQ7 553 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 UCN3Q969E3 161 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 VPS39Q96JC1 886 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 SERINC2Q96SA4 455 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 FAM173AQ9BQD7 235 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 GPATCH1Q9BRR8 931 aaKnown RBP12.34□□□□□ -0.43
DDX41-210ENST00000509576 NAT9Q9BTE0 207 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 MS4A8Q9BY19 250 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 IL1RL2Q9HB29 575 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 CTNNAL1Q9UBT7 734 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 NSD1Q96L73 2696 aaPredicted RBP12.34□□□□□ -0.43
DDX41-210ENST00000509576 OR14I1A6ND48 311 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 USP27XA6NNY8 438 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 C17orf105B2RV13 164 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 E7ESA3 106 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 SCELO95171 688 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 IFNA16P05015 189 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 ATP5A1P25705 553 aaKnown RBP12.33□□□□□ -0.44
DDX41-210ENST00000509576 HNMTP50135 292 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 MGAT5Q09328 741 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 ASPHQ12797 758 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 DLG1Q12959 904 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 MYBPHQ13203 477 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 PIGGQ5H8A4 983 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 PRAMEF20Q5VT98 475 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 B3GNT6Q6ZMB0 384 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 ACAD11Q709F0 780 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 ADAMTSL2Q86TH1 951 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 SLC22A16Q86VW1 577 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 TMEM132CQ8N3T6 1108 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 NKAPQ8N5F7 415 aaKnown RBP12.33□□□□□ -0.44
DDX41-210ENST00000509576 ACOT4Q8N9L9 421 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 GOLM1Q8NBJ4 401 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 ZNF473Q8WTR7 871 aaKnown RBP12.33□□□□□ -0.44
DDX41-210ENST00000509576 PPWD1Q96BP3 646 aaKnown RBP12.33□□□□□ -0.44
DDX41-210ENST00000509576 FAR2Q96K12 515 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 SH3GL2Q99962 352 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 CCDC77Q9BR77 488 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 SLC6A15Q9H2J7 730 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 ZNF703Q9H7S9 590 aaPredicted RBP12.33□□□□□ -0.44
DDX41-210ENST00000509576 PTBP2Q9UKA9 531 aaKnown RBP12.33□□□□□ -0.44
DDX41-210ENST00000509576 CLCA3PQ9Y6N3 262 aa12.33□□□□□ -0.44
DDX41-210ENST00000509576 FN1P02751 2386 aaKnown RBP12.32□□□□□ -0.44
DDX41-210ENST00000509576 FOXO6A8MYZ6 492 aa12.32□□□□□ -0.44
DDX41-210ENST00000509576 SAP18O00422 153 aaKnown RBP12.32□□□□□ -0.44
DDX41-210ENST00000509576 SEC31AO94979 1220 aaKnown RBP12.32□□□□□ -0.44
DDX41-210ENST00000509576 CD1DP15813 335 aa12.32□□□□□ -0.44
DDX41-210ENST00000509576 ZFP36L2P47974 494 aaKnown RBP12.32□□□□□ -0.44
DDX41-210ENST00000509576 MRPS25P82663 173 aaKnown RBP12.32□□□□□ -0.44
DDX41-210ENST00000509576 MORF4L2Q15014 288 aa12.32□□□□□ -0.44
DDX41-210ENST00000509576 C1orf185Q5T7R7 199 aa12.32□□□□□ -0.44
DDX41-210ENST00000509576 NDUFAF5Q5TEU4 345 aa12.32□□□□□ -0.44
DDX41-210ENST00000509576 C18orf63Q68DL7 685 aa12.32□□□□□ -0.44
DDX41-210ENST00000509576 TRIM40Q6P9F5 258 aa12.32□□□□□ -0.44
DDX41-210ENST00000509576 FAM47EQ6ZV65 393 aa12.32□□□□□ -0.44
DDX41-210ENST00000509576 TGIF2LYQ8IUE0 185 aa12.32□□□□□ -0.44
DDX41-210ENST00000509576 MMP21Q8N119 569 aa12.32□□□□□ -0.44
DDX41-210ENST00000509576 FBXO36Q8NEA4 188 aa12.32□□□□□ -0.44
DDX41-210ENST00000509576 OR10Q1Q8NGQ4 319 aa12.32□□□□□ -0.44
DDX41-210ENST00000509576 OR8K3Q8NH51 312 aa12.32□□□□□ -0.44
DDX41-210ENST00000509576 OR14A16Q8NHC5 309 aa12.32□□□□□ -0.44
DDX41-210ENST00000509576 FOXC2Q99958 501 aa12.32□□□□□ -0.44
DDX41-210ENST00000509576 ZNF717Q9BY31 904 aaPredicted RBP12.32□□□□□ -0.44
DDX41-210ENST00000509576 DERL2Q9GZP9 239 aa12.32□□□□□ -0.44
DDX41-210ENST00000509576 RHOJQ9H4E5 214 aa12.32□□□□□ -0.44
DDX41-210ENST00000509576 EHD1Q9H4M9 534 aa12.32□□□□□ -0.44
DDX41-210ENST00000509576 DNAJC11Q9NVH1 559 aa12.32□□□□□ -0.44
DDX41-210ENST00000509576 DNAJB12Q9NXW2 375 aaKnown RBP12.32□□□□□ -0.44
DDX41-210ENST00000509576 GPRC5BQ9NZH0 403 aa12.32□□□□□ -0.44
DDX41-210ENST00000509576 CRIM1Q9NZV1 1036 aa12.32□□□□□ -0.44
DDX41-210ENST00000509576 CHCHD2Q9Y6H1 151 aaPredicted RBP12.32□□□□□ -0.44
DDX41-210ENST00000509576 PCNX3Q9H6A9 2034 aa12.32□□□□□ -0.44
DDX41-210ENST00000509576 ANKDD1BA6NHY2 528 aa12.31□□□□□ -0.44
DDX41-210ENST00000509576 ACOT7O00154 380 aa12.31□□□□□ -0.44
DDX41-210ENST00000509576 BCKDKO14874 412 aa12.31□□□□□ -0.44
DDX41-210ENST00000509576 PROM1O43490 865 aa12.31□□□□□ -0.44
DDX41-210ENST00000509576 SUSD5O60279 629 aa12.31□□□□□ -0.44
DDX41-210ENST00000509576 CD99P14209 185 aa12.31□□□□□ -0.44
DDX41-210ENST00000509576 RPL21P46778 160 aaKnown RBP12.31□□□□□ -0.44
DDX41-210ENST00000509576 HNRNPH2P55795 449 aaKnown RBP12.31□□□□□ -0.44
DDX41-210ENST00000509576 FOXD4Q12950 439 aaPredicted RBP12.31□□□□□ -0.44
DDX41-210ENST00000509576 PDIA2Q13087 525 aaKnown RBP12.31□□□□□ -0.44
DDX41-210ENST00000509576 CEBPEQ15744 281 aa12.31□□□□□ -0.44
DDX41-210ENST00000509576 MPEG1Q2M385 716 aa12.31□□□□□ -0.44
DDX41-210ENST00000509576 FNDC7Q5VTL7 733 aa12.31□□□□□ -0.44
DDX41-210ENST00000509576 FAM219BQ5XKK7 198 aa12.31□□□□□ -0.44
DDX41-210ENST00000509576 BICRALQ6AI39 1079 aa12.31□□□□□ -0.44
DDX41-210ENST00000509576 ARSKQ6UWY0 536 aa12.31□□□□□ -0.44
DDX41-210ENST00000509576 TMEM64Q6YI46 380 aa12.31□□□□□ -0.44
DDX41-210ENST00000509576 RGS9BPQ6ZS82 235 aa12.31□□□□□ -0.44
DDX41-210ENST00000509576 GK5Q6ZS86 529 aa12.31□□□□□ -0.44
DDX41-210ENST00000509576 CAPN12Q6ZSI9 719 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms