RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 C9orf50Q5SZB4 431 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 ATF7IP2Q5U623 682 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 ARL6IP4Q66PJ3 421 aaKnown RBP4.3□□□□□ -1.72
NIPBL-206ENST00000509429 TCEAL6Q6IPX3 200 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 ABHD12BQ7Z5M8 362 aaPredicted RBP4.3□□□□□ -1.72
NIPBL-206ENST00000509429 ANKRD46Q86W74 232 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 RALGPS2Q86X27 583 aaPredicted RBP4.3□□□□□ -1.72
NIPBL-206ENST00000509429 KLBQ86Z14 1044 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 RBM45Q8IUH3 476 aaKnown RBP4.3□□□□□ -1.72
NIPBL-206ENST00000509429 CENPLQ8N0S6 344 aaPredicted RBP4.3□□□□□ -1.72
NIPBL-206ENST00000509429 ARHGAP24Q8N264 748 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 ZNF610Q8N9Z0 462 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 FAM47BQ8NA70 645 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 ACBD4Q8NC06 268 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 SLC17A8Q8NDX2 589 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 ADPRHL1Q8NDY3 354 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 BEST2Q8NFU1 509 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 OR2L5Q8NG80 312 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 OR10H4Q8NGA5 316 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 OR9K2Q8NGE7 335 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 OR56B1Q8NGI3 324 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 RNASE11Q8TAA1 199 aaKnown RBP4.3□□□□□ -1.72
NIPBL-206ENST00000509429 BRIX1Q8TDN6 353 aaKnown RBP4.3□□□□□ -1.72
NIPBL-206ENST00000509429 PYROXD1Q8WU10 500 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 ST8SIA2Q92186 375 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 HSD17B8Q92506 261 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 ADIPOR1Q96A54 375 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 TCEAL4Q96EI5 215 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 MRPL48Q96GC5 212 aaKnown RBP4.3□□□□□ -1.72
NIPBL-206ENST00000509429 TMEM80Q96HE8 168 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 PRR11Q96HE9 360 aaPredicted RBP4.3□□□□□ -1.72
NIPBL-206ENST00000509429 ZNF512Q96ME7 567 aaPredicted RBP4.3□□□□□ -1.72
NIPBL-206ENST00000509429 MBOAT7Q96N66 472 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 ZNF285Q96NJ3 590 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 XPO6Q96QU8 1125 aaKnown RBP4.3□□□□□ -1.72
NIPBL-206ENST00000509429 PCDHB18PQ96TA0 734 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 PARK7Q99497 189 aaKnown RBP4.3□□□□□ -1.72
NIPBL-206ENST00000509429 TMEM47Q9BQJ4 181 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 TMEM246Q9BRR3 403 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 WDR83Q9BRX9 315 aaKnown RBP4.3□□□□□ -1.72
NIPBL-206ENST00000509429 ALKBH7Q9BT30 221 aaPredicted RBP4.3□□□□□ -1.72
NIPBL-206ENST00000509429 HTATIP2Q9BUP3 242 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 PHF7Q9BWX1 381 aaPredicted RBP4.3□□□□□ -1.72
NIPBL-206ENST00000509429 ANKRD60Q9BZ19 345 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 IL22Q9GZX6 179 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 RAB1BQ9H0U4 201 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 POLR3FQ9H1D9 316 aaPredicted RBP4.3□□□□□ -1.72
NIPBL-206ENST00000509429 EPC1Q9H2F5 836 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 OR51M1Q9H341 326 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 SLC32A1Q9H598 525 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 ASB7Q9H672 318 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 TMEM185BQ9H7F4 350 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 CHODLQ9H9P2 273 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 MCCC2Q9HCC0 563 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 IL23AQ9NPF7 189 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 GSN-AS1Q9NRJ2 163 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 MED17Q9NVC6 651 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 OSER1Q9NX31 292 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 ADAM22Q9P0K1 906 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 GCNT4Q9P109 453 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 SEMA5BQ9P283 1151 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 SLC17A7Q9P2U7 560 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 DKK2Q9UBU2 259 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 BTNL2Q9UIR0 455 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 MKLN1Q9UL63 735 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 TBC1D24Q9ULP9 559 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 KCNK6Q9Y257 313 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.3□□□□□ -1.72
NIPBL-206ENST00000509429 NUBP2Q9Y5Y2 271 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 TMEM131LA2VDJ0 1609 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 RIMBP3CA6NJZ7 1639 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 RIMBP3BA6NNM3 1639 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 RIMBP3Q9UFD9 1639 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 PTPRMP28827 1452 aa4.3□□□□□ -1.72
NIPBL-206ENST00000509429 CD109Q6YHK3 1445 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 TNRQ92752 1358 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 A0A087WV48 116 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 CCDC187A0A096LP49 1063 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 MAGEA13PA6NCF6 341 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 C5orf60A6NFR6 353 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 PRAMEF25A6NGN4 478 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 ANXA2P2A6NMY6 339 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 PRAMEF26H0Y7S4 382 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 KLRC4-KLRK1H3BQV0 150 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 CCSO14618 274 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 STX16O14662 325 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 MID1O15344 667 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 MAGEB2O15479 319 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 RNF13O43567 381 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 PRAMEF4O60810 478 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 PRAMEF11O60813 436 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 ATP2C2O75185 946 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 SNNO75324 88 aaPredicted RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 SLC43A1O75387 559 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 MED6O75586 246 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 GLCEO94923 617 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 LYPLA2O95372 231 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 NADKO95544 446 aaPredicted RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 ATP6V1G2O95670 118 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 LCATP04180 440 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms