RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 STAG3L4Q8TBR4 150 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 CA5BP1Q8WTZ4 195 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 PTPMT1Q8WUK0 201 aaPredicted RBP10.14□□□□□ -0.79
RNF4-212ENST00000509258 ANKRD9Q96BM1 317 aaPredicted RBP10.14□□□□□ -0.79
RNF4-212ENST00000509258 SERINC2Q96SA4 455 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 DMRTA2Q96SC8 542 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 EFCAB11Q9BUY7 163 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 CAPS2Q9BXY5 557 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 CNOT10Q9H9A5 744 aaKnown RBP10.14□□□□□ -0.79
RNF4-212ENST00000509258 NMRAL1Q9HBL8 299 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 DEPPQ9NTK1 212 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 PPT2Q9UMR5 302 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 A0A1W2PS29 197 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 HRKO00198 91 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 KLK8O60259 260 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 ITGA10O75578 1167 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 URI1O94763 535 aaPredicted RBP10.13□□□□□ -0.79
RNF4-212ENST00000509258 SCELO95171 688 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 CRABP2P29373 138 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 TRHRP34981 398 aaPredicted RBP10.13□□□□□ -0.79
RNF4-212ENST00000509258 PIK3CGP48736 1102 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 HLCSP50747 726 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 HNRNPH2P55795 449 aaKnown RBP10.13□□□□□ -0.79
RNF4-212ENST00000509258 HSD17B7P56937 341 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 GPR85P60893 370 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 TLE4Q04727 773 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 PCDH1Q08174 1060 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 TGM3Q08188 693 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 SLC13A2Q13183 592 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 NAB1Q13506 487 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 DDX39BQ13838 428 aaKnown RBP10.13□□□□□ -0.79
RNF4-212ENST00000509258 SETDB1Q15047 1291 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 UAP1Q16222 522 aaPredicted RBP10.13□□□□□ -0.79
RNF4-212ENST00000509258 TECRLQ5HYJ1 363 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 C18orf63Q68DL7 685 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 RPS27LQ71UM5 84 aaKnown RBP10.13□□□□□ -0.79
RNF4-212ENST00000509258 TBC1D1Q86TI0 1168 aaPredicted RBP10.13□□□□□ -0.79
RNF4-212ENST00000509258 OR4N5Q8IXE1 308 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 ZNF595Q8IYB9 648 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 TEX9Q8N6V9 391 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 ACBD4Q8NC06 268 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 HUS1BQ8NHY5 278 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 SDCCAG3Q96C92 435 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 VMP1Q96GC9 406 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 SEC16BQ96JE7 1060 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 FUT8Q9BYC5 575 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 PITHD1Q9GZP4 211 aaPredicted RBP10.13□□□□□ -0.79
RNF4-212ENST00000509258 ENKD1Q9H0I2 346 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 CDC42EP4Q9H3Q1 356 aaKnown RBP10.13□□□□□ -0.79
RNF4-212ENST00000509258 ACSS3Q9H6R3 686 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 MCCC2Q9HCC0 563 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 ADAP2Q9NPF8 381 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 OPTCQ9UBM4 332 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 FBXW2Q9UKT8 454 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 ACOT9Q9Y305 439 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 HRH3Q9Y5N1 445 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 KIAA1549Q9HCM3 1950 aa10.13□□□□□ -0.79
RNF4-212ENST00000509258 A0A096LPK6 155 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 A0A1B0GTL3 188 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 ACOT7O00154 380 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 PLPP1O14494 284 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 ADAM10O14672 748 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 FGF17O60258 216 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 CTNSO60931 367 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 EEDO75530 441 aaKnown RBP10.12□□□□□ -0.79
RNF4-212ENST00000509258 OR6B1O95007 311 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 ACSL3O95573 720 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 S100BP04271 92 aaPredicted RBP10.12□□□□□ -0.79
RNF4-212ENST00000509258 PTGS2P35354 604 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 MAGEA12P43365 314 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 MEOX1P50221 254 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 KRTAP10-9P60411 292 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 RPS13P62277 151 aaKnown RBP10.12□□□□□ -0.79
RNF4-212ENST00000509258 TESK1Q15569 626 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 PFKFB4Q16877 469 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 GRHL2Q6ISB3 625 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 MED27Q6P2C8 311 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 SPNS3Q6ZMD2 512 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 C3P1Q6ZMU1 363 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 MEX3BQ6ZN04 569 aaKnown RBP10.12□□□□□ -0.79
RNF4-212ENST00000509258 GOLGA7Q7Z5G4 137 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 SULF2Q8IWU5 870 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 GPALPP1Q8IXQ4 340 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 CYP4Z2PQ8N1L4 340 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 MMGT1Q8N4V1 131 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 UHMK1Q8TAS1 419 aaKnown RBP10.12□□□□□ -0.79
RNF4-212ENST00000509258 ASB5Q8WWX0 329 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 NSUN5Q96P11 429 aaKnown RBP10.12□□□□□ -0.79
RNF4-212ENST00000509258 CDK15Q96Q40 435 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 MTERF1Q99551 399 aaKnown RBP10.12□□□□□ -0.79
RNF4-212ENST00000509258 TREX2Q9BQ50 279 aaPredicted RBP10.12□□□□□ -0.79
RNF4-212ENST00000509258 ALOXE3Q9BYJ1 711 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 COPS7BQ9H9Q2 264 aaPredicted RBP10.12□□□□□ -0.79
RNF4-212ENST00000509258 PRM3Q9NNZ6 103 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 TIMMDC1Q9NPL8 285 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 DMRT3Q9NQL9 472 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 CPSF2Q9P2I0 782 aaKnown RBP10.12□□□□□ -0.79
RNF4-212ENST00000509258 RNF11Q9Y3C5 154 aa10.12□□□□□ -0.79
RNF4-212ENST00000509258 A0A087X1B8 175 aa10.11□□□□□ -0.79
RNF4-212ENST00000509258 A8MVJ9 347 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms