RNA–Protein interactions for RNA: ENST00000508504.1

TRIM60-203, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM60, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-203ENST00000508504 MIER2Q8N344 545 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 CCDC197Q8NCU1 140 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 NLGN4YQ8NFZ3 816 aaPredicted RBP16.43■□□□□ 0.22
TRIM60-203ENST00000508504 DNAJB14Q8TBM8 379 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 CT55Q8WUE5 264 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 SPSB2Q99619 263 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 DPH2Q9BQC3 489 aaPredicted RBP16.43■□□□□ 0.22
TRIM60-203ENST00000508504 DPY30Q9C005 99 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 MKKSQ9NPJ1 570 aaPredicted RBP16.43■□□□□ 0.22
TRIM60-203ENST00000508504 MS4A12Q9NXJ0 267 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 CCDC167Q9P0B6 97 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 MSRB2Q9Y3D2 182 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 ZZEF1O43149 2961 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 NUP214P35658 2090 aaPredicted RBP16.43■□□□□ 0.22
TRIM60-203ENST00000508504 PSMD12O00232 456 aaPredicted RBP16.43■□□□□ 0.22
TRIM60-203ENST00000508504 SCAMP2O15127 329 aaKnown RBP16.43■□□□□ 0.22
TRIM60-203ENST00000508504 FGF17O60258 216 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 RAD1O60671 282 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 SLC22A3O75751 556 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 KLF7O75840 302 aaPredicted RBP16.43■□□□□ 0.22
TRIM60-203ENST00000508504 CCNYL3P0C7X3 344 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 EFNA1P20827 205 aaPredicted RBP16.43■□□□□ 0.22
TRIM60-203ENST00000508504 ASMTP46597 345 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 RPS18P62269 152 aaKnown RBP16.43■□□□□ 0.22
TRIM60-203ENST00000508504 PHC1P78364 1004 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 DUSP2Q05923 314 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 HEPACAMQ14CZ8 416 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 NCF4Q15080 339 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 MINDY4Q4G0A6 757 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 SLC48A1Q6P1K1 146 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 IKBIPQ70UQ0 350 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 NKD1Q969G9 470 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 NXPE2Q96DL1 559 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 MYLK2Q9H1R3 596 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 REEP4Q9H6H4 257 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 CLK4Q9HAZ1 481 aaKnown RBP16.43■□□□□ 0.22
TRIM60-203ENST00000508504 THSD1Q9NS62 852 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 NEUROG3Q9Y4Z2 214 aa16.43■□□□□ 0.22
TRIM60-203ENST00000508504 NUP210LQ5VU65 1888 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 LOC101059948A0A1B0GTJ6 334 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 C1orf226A1L170 272 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 VSTM2BA6NLU5 285 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.42■□□□□ 0.22
TRIM60-203ENST00000508504 RECKO95980 971 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 C8orf89P0DMQ9 161 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 LAMP1P11279 417 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 TCN2P20062 427 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 PRPS1L1P21108 318 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 JAK1P23458 1154 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 PTGER1P34995 402 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 STAT5AP42229 794 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 DGKQP52824 942 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 FOLH1Q04609 750 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 PDE7AQ13946 482 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 SQLEQ14534 574 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 SPANXN4Q5MJ08 99 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 MFSD4BQ5TF39 518 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 PARP9Q8IXQ6 854 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 CPSF7Q8N684 471 aaKnown RBP16.42■□□□□ 0.22
TRIM60-203ENST00000508504 ESX1Q8N693 406 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 AMER2Q8N7J2 671 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 ENDOVQ8N8Q3 282 aaKnown RBP16.42■□□□□ 0.22
TRIM60-203ENST00000508504 ANKS4BQ8N8V4 417 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 TSLPQ969D9 159 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 CIDECQ96AQ7 238 aaPredicted RBP16.42■□□□□ 0.22
TRIM60-203ENST00000508504 EXOSC8Q96B26 276 aaKnown RBP16.42■□□□□ 0.22
TRIM60-203ENST00000508504 ANKRD9Q96BM1 317 aaPredicted RBP16.42■□□□□ 0.22
TRIM60-203ENST00000508504 OR1F2PQ96R84 312 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 TGIF2Q9GZN2 237 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 VN1R1Q9GZP7 353 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 SLC26A1Q9H2B4 701 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 CLMPQ9H6B4 373 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 MIEF1Q9NQG6 463 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 SH3BP4Q9P0V3 963 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 CROTQ9UKG9 612 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 ACSL6Q9UKU0 697 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 MKL2Q9ULH7 1088 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 ACACAQ13085 2346 aa16.42■□□□□ 0.22
TRIM60-203ENST00000508504 TERTO14746 1132 aaKnown RBP16.41■□□□□ 0.22
TRIM60-203ENST00000508504 ERAL1O75616 437 aaKnown RBP16.41■□□□□ 0.22
TRIM60-203ENST00000508504 COX7A2P14406 83 aa16.41■□□□□ 0.22
TRIM60-203ENST00000508504 PPP2R1BP30154 601 aa16.41■□□□□ 0.22
TRIM60-203ENST00000508504 TLX1P31314 330 aaPredicted RBP16.41■□□□□ 0.22
TRIM60-203ENST00000508504 MRPL19P49406 292 aaKnown RBP16.41■□□□□ 0.22
TRIM60-203ENST00000508504 STX1BP61266 288 aa16.41■□□□□ 0.22
TRIM60-203ENST00000508504 RHAGQ02094 409 aa16.41■□□□□ 0.22
TRIM60-203ENST00000508504 OCA2Q04671 838 aa16.41■□□□□ 0.22
TRIM60-203ENST00000508504 SRSF6Q13247 344 aaKnown RBP16.41■□□□□ 0.22
TRIM60-203ENST00000508504 FAM174BQ3ZCQ3 159 aa16.41■□□□□ 0.22
TRIM60-203ENST00000508504 AGKQ53H12 422 aa16.41■□□□□ 0.22
TRIM60-203ENST00000508504 TREML1Q86YW5 311 aa16.41■□□□□ 0.22
TRIM60-203ENST00000508504 CACNA2D3Q8IZS8 1091 aa16.41■□□□□ 0.22
TRIM60-203ENST00000508504 VPS33AQ96AX1 596 aa16.41■□□□□ 0.22
TRIM60-203ENST00000508504 FKBP10Q96AY3 582 aa16.41■□□□□ 0.22
TRIM60-203ENST00000508504 MIEF2Q96C03 454 aa16.41■□□□□ 0.22
TRIM60-203ENST00000508504 CNRIP1Q96F85 164 aaPredicted RBP16.41■□□□□ 0.22
TRIM60-203ENST00000508504 FAIM2Q9BWQ8 316 aa16.41■□□□□ 0.22
TRIM60-203ENST00000508504 SLAMF7Q9NQ25 335 aa16.41■□□□□ 0.22
TRIM60-203ENST00000508504 NECTIN3Q9NQS3 549 aa16.41■□□□□ 0.22
TRIM60-203ENST00000508504 ZIM2Q9NZV7 527 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms