RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 RPF2Q9H7B2 306 aaKnown RBP9.65□□□□□ -0.86
HTT-204ENST00000508321 AKTIPQ9H8T0 292 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 AKIRIN1Q9H9L7 192 aaPredicted RBP9.65□□□□□ -0.86
HTT-204ENST00000508321 TCF7L2Q9NQB0 619 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 MIEF1Q9NQG6 463 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 PRTFDC1Q9NRG1 225 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 FGFR1OP2Q9NVK5 253 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 TEX10Q9NXF1 929 aaPredicted RBP9.65□□□□□ -0.86
HTT-204ENST00000508321 C3orf18Q9UK00 162 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 FBXW2Q9UKT8 454 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 PSME2Q9UL46 239 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 MKL2Q9ULH7 1088 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 ATG4BQ9Y4P1 393 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 POLR3HQ9Y535 204 aaPredicted RBP9.65□□□□□ -0.86
HTT-204ENST00000508321 PCDHA9Q9Y5H5 950 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 ZFYVE26Q68DK2 2539 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 ANKRD11Q6UB99 2663 aaPredicted RBP9.65□□□□□ -0.87
HTT-204ENST00000508321 URB1O60287 2271 aaKnown RBP9.65□□□□□ -0.87
HTT-204ENST00000508321 FASNP49327 2511 aaKnown RBP9.64□□□□□ -0.87
HTT-204ENST00000508321 LOC102723996A0A087X1L8 192 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 TBX19O60806 448 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 DIAPH2O60879 1101 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 CTNSO60931 367 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 CNOT3O75175 753 aaKnown RBP9.64□□□□□ -0.87
HTT-204ENST00000508321 ALOX12BO75342 701 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 SLITRK5O94991 958 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 GBAP04062 536 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 UMODP07911 640 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 BCKDHAP12694 445 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 IDO1P14902 403 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 DDCP20711 480 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 PRPS1L1P21108 318 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 EPHA3P29320 983 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 LSP1P33241 339 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 CLNS1AP54105 237 aaKnown RBP9.64□□□□□ -0.87
HTT-204ENST00000508321 EMP2P54851 167 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 AQP5P55064 265 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 TAS2R50P59544 299 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 IGLV3-21P80748 117 aaPredicted RBP9.64□□□□□ -0.87
HTT-204ENST00000508321 PLIN5Q00G26 463 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 RHAGQ02094 409 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 TLE3Q04726 772 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 CDC20Q12834 499 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 SLC13A2Q13183 592 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 GSTA3Q16772 222 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 RFTN2Q52LD8 501 aaPredicted RBP9.64□□□□□ -0.87
HTT-204ENST00000508321 FAM219BQ5XKK7 198 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 SLC48A1Q6P1K1 146 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 TMEM205Q6UW68 189 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 MAVSQ7Z434 540 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 R3HCC1LQ7Z5L2 792 aaKnown RBP9.64□□□□□ -0.87
HTT-204ENST00000508321 MRGPREQ86SM8 312 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 VASH2Q86V25 355 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 NATD1Q8N6N6 113 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.64□□□□□ -0.87
HTT-204ENST00000508321 ADAMTS17Q8TE56 1095 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 C16orf78Q8WTQ4 265 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 CATSPER2Q96P56 530 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 RBCK1Q9BYM8 510 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 BRINP2Q9C0B6 783 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 NPHS2Q9NP85 383 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 GIMAP4Q9NUV9 329 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 TMEM45AQ9NWC5 275 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 KLHL14Q9P2G3 628 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 IL17BQ9UHF5 180 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 TRIM33Q9UPN9 1127 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 DLGAP4Q9Y2H0 992 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 RAXQ9Y2V3 346 aa9.64□□□□□ -0.87
HTT-204ENST00000508321 GOLGA8QA0A0J9YX86 632 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 A0A1W2PR48 441 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 TCRBV16S1A1N1A0A5B0 115 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 GOLGA8OA6NCC3 632 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 GOLGA8NF8WBI6 632 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 PEX12O00623 359 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 DYRK3O43781 588 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 B4GALT2O60909 372 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 CDC123O75794 336 aaPredicted RBP9.63□□□□□ -0.87
HTT-204ENST00000508321 IL3P08700 152 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 COX7A2P14406 83 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 F8A1P23610 371 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 PIK3R1P27986 724 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 GALNSP34059 522 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 MRPL19P49406 292 aaKnown RBP9.63□□□□□ -0.87
HTT-204ENST00000508321 IDH3AP50213 366 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 RRADP55042 308 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 GNGT1P63211 74 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 ACTN3Q08043 901 aaPredicted RBP9.63□□□□□ -0.87
HTT-204ENST00000508321 STX4Q12846 297 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 IL10RAQ13651 578 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 NSDHLQ15738 373 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 SLC9B1Q4ZJI4 515 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 IL23RQ5VWK5 629 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 FAM71E1Q6IPT2 247 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 CCDC81Q6ZN84 652 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 CLNKQ7Z7G1 428 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 LIX1Q8N485 282 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 DNAJB14Q8TBM8 379 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 SNRNP27Q8WVK2 155 aaKnown RBP9.63□□□□□ -0.87
HTT-204ENST00000508321 TM4SF18Q96CE8 201 aa9.63□□□□□ -0.87
HTT-204ENST00000508321 KLHL29Q96CT2 875 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms