RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 PCNAP12004 261 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 COX6B1P14854 86 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 CRABP2P29373 138 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 SERPINB1P30740 379 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 PTGS2P35354 604 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 NR0B1P51843 470 aaKnown RBP12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 ETF1P62495 437 aaKnown RBP12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 IGLV3-21P80748 117 aaPredicted RBP12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 IRF9Q00978 393 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 ID2Q02363 134 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 GUCY2DQ02846 1103 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 STX4Q12846 297 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 BMPR2Q13873 1038 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 KHDRBS2Q5VWX1 349 aaKnown RBP12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 MED27Q6P2C8 311 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 HSDL2Q6YN16 418 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 ZNF572Q7Z3I7 529 aaPredicted RBP12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 CD163Q86VB7 1156 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 GPALPP1Q8IXQ4 340 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 RNF175Q8N4F7 328 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 OR7G3Q8NG95 312 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 OR52N2Q8NGI0 321 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 FAM57AQ8TBR7 257 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 SLC2A12Q8TD20 617 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 KCTD4Q8WVF5 259 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 ASB15Q8WXK1 588 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 ANKRD9Q96BM1 317 aaPredicted RBP12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 NXNL1Q96CM4 212 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 MTFMTQ96DP5 389 aaKnown RBP12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 RASL10BQ96S79 203 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 SORBS1Q9BX66 1292 aaKnown RBP12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 OR8D2Q9GZM6 311 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 OPTCQ9UBM4 332 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 ERVK-11Q9UQG0 969 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.07□□□□□ -0.482e-11■■■□□ 17
HMGCS1-205ENST00000508319 ESYT3A0FGR9 886 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 HMX2A2RU54 273 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 C17orf105B2RV13 164 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 WWP2O00308 870 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 SAP18O00422 153 aaKnown RBP12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 FGF17O60258 216 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 CDC40O60508 579 aaKnown RBP eCLIP12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 ZNF354AO60765 605 aaPredicted RBP12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 ETHE1O95571 254 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 TPOP07202 933 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 CASQ1P31415 396 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 SSR2P43308 183 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 RNF4P78317 190 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 SERTAD2Q14140 314 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 GRHL2Q6ISB3 625 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 IL20RBQ6UXL0 311 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 SYT10Q6XYQ8 523 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 MARVELD2Q8N4S9 558 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 ACBD4Q8NC06 268 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 OR2M7Q8NG81 312 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 OR8K3Q8NH51 312 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 RHEBL1Q8TAI7 183 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 CMTM7Q96FZ5 175 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 SCYL1Q96KG9 808 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 ZNF717Q9BY31 904 aaPredicted RBP12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 OR51B5Q9H339 312 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 ZDHHC11Q9H8X9 412 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 DMRT3Q9NQL9 472 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 PPT2Q9UMR5 302 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 HRH3Q9Y5N1 445 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 SPACA6W5XKT8 324 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 F8P00451 2351 aa12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 PHF3Q92576 2039 aaKnown RBP12.06□□□□□ -0.48
HMGCS1-205ENST00000508319 SYCE1LA8MT33 242 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 G3V3Y1 287 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 PLPP1O14494 284 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 PRKRAO75569 313 aaKnown RBP12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 C2P06681 752 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 EPB42P16452 691 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 CPN2P22792 545 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 PIK3CBP42338 1070 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 KIR3DL1P43629 444 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 HNRNPH2P55795 449 aaKnown RBP12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 DDX39BQ13838 428 aaKnown RBP12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 SETDB1Q15047 1291 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 AP5B1Q2VPB7 878 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 DEPDC1Q5TB30 811 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 MROH9Q5TGP6 573 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 ARHGAP11AQ6P4F7 1023 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 CHSY3Q70JA7 882 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 CCDC91Q7Z6B0 441 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 ZNF295-AS1Q8N0V1 137 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 EID3Q8N140 333 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 TEX9Q8N6V9 391 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 HUS1BQ8NHY5 278 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 ZNF721Q8TF20 911 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 SDCCAG3Q96C92 435 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 TTTY12Q9BZ98 90 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 SNX15Q9NRS6 342 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 ZDHHC18Q9NUE0 388 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 ACOT9Q9Y305 439 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 TSC22D4Q9Y3Q8 395 aa12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 INTS1Q8N201 2190 aaKnown RBP12.05□□□□□ -0.48
HMGCS1-205ENST00000508319 A0A087X1B8 175 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 CCDC189A1A4V9 331 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms