RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 CDK2AP1O14519 115 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 FGF17O60258 216 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 ZFAND5O76080 213 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 ETHE1O95571 254 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 INHBAP08476 426 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 GRNP28799 593 aaKnown RBP13.27□□□□□ -0.29
RAB28-205ENST00000508274 SERPINB1P30740 379 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 PTGER1P34995 402 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 MAGEA12P43365 314 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 SSR4P51571 173 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 RAP1GDS1P52306 607 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 HNRNPH2P55795 449 aaKnown RBP13.27□□□□□ -0.29
RAB28-205ENST00000508274 ADORA2A-AS1P86434 159 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 CPSF6Q16630 551 aaKnown RBP eCLIP13.27□□□□□ -0.291e-6■□□□□ 10.4
RAB28-205ENST00000508274 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.27□□□□□ -0.29
RAB28-205ENST00000508274 KRTCAP3Q53RY4 240 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 LIPJQ5W064 366 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 C18orf63Q68DL7 685 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 KLC3Q6P597 504 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 MRGPRGQ86SM5 289 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 SPPL2CQ8IUH8 684 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 PTGR2Q8N8N7 351 aaPredicted RBP13.27□□□□□ -0.29
RAB28-205ENST00000508274 SLC2A12Q8TD20 617 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 DAZLQ92904 295 aaKnown RBP13.27□□□□□ -0.29
RAB28-205ENST00000508274 ISL2Q96A47 359 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 PHF21BQ96EK2 531 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 CDK15Q96Q40 435 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 ZNF717Q9BY31 904 aaPredicted RBP13.27□□□□□ -0.29
RAB28-205ENST00000508274 IPPKQ9H8X2 491 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 MYOTQ9UBF9 498 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 RNF11Q9Y3C5 154 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 PCDHGA11Q9Y5H2 935 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 CACNA1CQ13936 2221 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 ZNF407Q9C0G0 2248 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 PEX1O43933 1283 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 ZNF354AO60765 605 aaPredicted RBP13.26□□□□□ -0.29
RAB28-205ENST00000508274 EEDO75530 441 aaKnown RBP13.26□□□□□ -0.29
RAB28-205ENST00000508274 OR6B1O95007 311 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 MLYCDO95822 493 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 TNNI3P19429 210 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 PIK3CBP42338 1070 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 NEK2P51955 445 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 HK2P52789 917 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 FAM219BQ5XKK7 198 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 HSDL2Q6YN16 418 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 Q6ZPB1 254 aaPredicted RBP13.26□□□□□ -0.29
RAB28-205ENST00000508274 DGAT2L6Q6ZPD8 337 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 FGD2Q7Z6J4 655 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 MORN4Q8NDC4 146 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 OR52B6Q8NGF0 335 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 OR14A16Q8NHC5 309 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 DOK4Q8TEW6 326 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 RGMAQ96B86 450 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 NSUN5Q96P11 429 aaKnown RBP13.26□□□□□ -0.29
RAB28-205ENST00000508274 RASL10BQ96S79 203 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 DEPPQ9NTK1 212 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 XPR1Q9UBH6 696 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 ADGRE2Q9UHX3 823 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 ERVK-11Q9UQG0 969 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 YARS2Q9Y2Z4 477 aaKnown RBP13.26□□□□□ -0.29
RAB28-205ENST00000508274 TSC22D4Q9Y3Q8 395 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 ATG4BQ9Y4P1 393 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 SPACA6W5XKT8 324 aa13.26□□□□□ -0.29
RAB28-205ENST00000508274 A0A0G2JMM0 328 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 A0A1W2PPB8 328 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 A0A1W2PRS3 328 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 ARHGAP10A1A4S6 786 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 CCDC189A1A4V9 331 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 SYNDIG1LA6NDD5 238 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 WASHC1A8K0Z3 465 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 A8MVJ9 347 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 KIR3DP1A8MWS1 328 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 POC1B-GALNT4F8VUJ3 575 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 H0YIV9 168 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 OR7A17O14581 309 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 HS6ST1O60243 411 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 UGDHO60701 494 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 CTAGE8P0CG41 777 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 SOX3P41225 446 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 NR0B1P51843 470 aaKnown RBP13.25□□□□□ -0.29
RAB28-205ENST00000508274 CASP6P55212 293 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 IGLV3-21P80748 117 aaPredicted RBP13.25□□□□□ -0.29
RAB28-205ENST00000508274 TNFRSF17Q02223 184 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 FOLH1Q04609 750 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 SERTAD2Q14140 314 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 IL20RBQ6UXL0 311 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 C3P1Q6ZMU1 363 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 CEP128Q6ZU80 1094 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 CTAGE4Q8IX94 777 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 GHDCQ8N2G8 530 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 PSD4Q8NDX1 1056 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 WDR20Q8TBZ3 569 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 ZNF721Q8TF20 911 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 DCAKDQ8WVC6 231 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 ASB15Q8WXK1 588 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 PPWD1Q96BP3 646 aaKnown RBP13.25□□□□□ -0.29
RAB28-205ENST00000508274 OCEL1Q9H607 264 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 RPF2Q9H7B2 306 aaKnown RBP13.25□□□□□ -0.29
RAB28-205ENST00000508274 NOL11Q9H8H0 719 aaKnown RBP13.25□□□□□ -0.29
RAB28-205ENST00000508274 HPF1Q9NWY4 346 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms