RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 SPACA6W5XKT8 324 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 ARHGAP21Q5T5U3 1957 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 NKX2-6A6NCS4 301 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 NPIPA2E9PIF3 369 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 NPIPA3F8WFD2 350 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 SAP18O00422 153 aaKnown RBP10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 RAD51CO43502 376 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 ZNF354AO60765 605 aaPredicted RBP10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 FAM155BO75949 473 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 GLSO94925 669 aaPredicted RBP10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 SCELO95171 688 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 ETHE1O95571 254 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 TGFB1P01137 390 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 GSTA2P09210 222 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 SLC35E2BP0CK96 405 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 CNR1P21554 472 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 HIST1H1TP22492 207 aaPredicted RBP10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 CPN2P22792 545 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 SSR2P43308 183 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 C2orf54Q08AI8 447 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 E2F2Q14209 437 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 AP5B1Q2VPB7 878 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 TMEM35AQ53FP2 167 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 EMC4Q5J8M3 183 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 MED27Q6P2C8 311 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 RGS9BPQ6ZS82 235 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 GK5Q6ZS86 529 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 C3orf62Q6ZUJ4 267 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 RAPH1Q70E73 1250 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 SLC22A16Q86VW1 577 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 CCDC71Q8IV32 467 aaPredicted RBP10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 PPM1NQ8N819 430 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 OR8K3Q8NH51 312 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 UBTD2Q8WUN7 234 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 RND1Q92730 232 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 UBE2E3Q969T4 207 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 ANKRD9Q96BM1 317 aaPredicted RBP10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 TREX2Q9BQ50 279 aaPredicted RBP10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 FAM173AQ9BQD7 235 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 SORBS1Q9BX66 1292 aaKnown RBP10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 PHACTR1Q9C0D0 580 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 ZDHHC11Q9H8X9 412 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 NPDC1Q9NQX5 325 aaPredicted RBP10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 PNPLA3Q9NST1 481 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 PYCARDQ9ULZ3 195 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 LIPGQ9Y5X9 500 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 INTS1Q8N201 2190 aaKnown RBP10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 TEP1Q99973 2627 aaKnown RBP10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 CSMD1Q96PZ7 3565 aa10.69□□□□□ -0.7
HMGCS1-204ENST00000507293 OTOGQ6ZRI0 2925 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 K7EPI3 171 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 UBXN8O00124 270 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 FGF17O60258 216 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 KERAO60938 352 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 CCL3P10147 92 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 COX7A2P14406 83 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 SERPINB1P30740 379 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 CHRNB4P30926 498 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 SPRP35270 261 aaPredicted RBP10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 CASP2P42575 452 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 DNASE1L1P49184 302 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 NUP107P57740 925 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 DDX39BQ13838 428 aaKnown RBP10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 KBTBD12Q3ZCT8 623 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 GRTP1Q5TC63 336 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 NDUFAF5Q5TEU4 345 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 KHDRBS2Q5VWX1 349 aaKnown RBP10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 OPN5Q6U736 354 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 FAM47EQ6ZV65 393 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 CHSY3Q70JA7 882 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 CYS1Q717R9 158 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 MAATS1Q7Z4T9 603 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 TBC1D1Q86TI0 1168 aaPredicted RBP10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 ISCA2Q86U28 154 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 CDH24Q86UP0 819 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 CCDC25Q86WR0 208 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 OR4N5Q8IXE1 308 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 LAS2Q8IYD9 372 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 FAM109AQ8N4B1 249 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 RNF175Q8N4F7 328 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 TMEM251Q8N6I4 163 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 GOLM1Q8NBJ4 401 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 OR7G3Q8NG95 312 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 OR5L2Q8NGL0 311 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 OR5M9Q8NGP3 310 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 OR5M3Q8NGP4 307 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 LILRB4Q8NHJ6 448 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 STAG3L4Q8TBR4 150 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 ZNF721Q8TF20 911 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 CMTM7Q96FZ5 175 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 DGAT2Q96PD7 388 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 SMC6Q96SB8 1091 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 ATOH8Q96SQ7 321 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 UCK2Q9BZX2 261 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 OR51B5Q9H339 312 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 NMRAL1Q9HBL8 299 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 MCCC2Q9HCC0 563 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 IGSF5Q9NSI5 407 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 SACM1LQ9NTJ5 587 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 OPTCQ9UBM4 332 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms