RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ALDH6A1Q02252 535 aaKnown RBP8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 CUL3Q13618 768 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 SERTAD2Q14140 314 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 TSNAXIP1Q2TAA8 658 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 KRTCAP3Q53RY4 240 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 RNFT1Q5M7Z0 435 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 Q6ZPB1 254 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 FJX1Q86VR8 437 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 CHERPQ8IWX8 916 aaKnown RBP8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 TMEM151AQ8N4L1 468 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 PTGR2Q8N8N7 351 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 FAM98AQ8NCA5 519 aaKnown RBP8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 MORN4Q8NDC4 146 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 OR8K3Q8NH51 312 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 OR14A16Q8NHC5 309 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 KIF18AQ8NI77 898 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 DAZLQ92904 295 aaKnown RBP8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 RGMAQ96B86 450 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 REPS1Q96D71 796 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 MTERF1Q99551 399 aaKnown RBP8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 NTMT1Q9BV86 223 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 SORBS1Q9BX66 1292 aaKnown RBP8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 ACTR8Q9H981 624 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 ZBTB26Q9HCK0 441 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 MS4A12Q9NXJ0 267 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 XPR1Q9UBH6 696 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 PCTPQ9UKL6 214 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 FBXW2Q9UKT8 454 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 TMCO1Q9UM00 188 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 ZNF835Q9Y2P0 537 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 RNF11Q9Y3C5 154 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 ANGPTL3Q9Y5C1 460 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 PCNX1Q96RV3 2341 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 NCOA6Q14686 2063 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 A0A0A6YYD5 115 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 MYOCOSA0A1B0GUC4 107 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 SAP18O00422 153 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 TMPRSS11DO60235 418 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 SLC19A2O60779 497 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 ZFAND5O76080 213 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 SEMA3DO95025 777 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 ETHE1O95571 254 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 MLYCDO95822 493 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 IGKV3-11P04433 115 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 IFNA16P05015 189 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 RPS17P08708 135 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 SNRPAP09012 282 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 CPN2P22792 545 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 PTX3P26022 381 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 COL8A1P27658 744 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 BSGP35613 385 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 SSR4P51571 173 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 RAP1GDS1P52306 607 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 HK2P52789 917 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 TNFRSF17Q02223 184 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 ID2Q02363 134 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 STX4Q12846 297 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 TRAF3Q13114 568 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 SLAMF1Q13291 335 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 DDX39BQ13838 428 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 CPSF6Q16630 551 aaKnown RBP eCLIP8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 MAPKAPK3Q16644 382 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 GGTA1PQ4G0N0 100 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 TIFABQ6ZNK6 161 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 C16orf47Q6ZP98 133 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 TAOK1Q7L7X3 1001 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 MDGA2Q7Z553 956 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 MYLK4Q86YV6 388 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 GPALPP1Q8IXQ4 340 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 CYP4Z2PQ8N1L4 340 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 CPSF7Q8N684 471 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 CEP112Q8N8E3 955 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 ZNF321PQ8N8H1 164 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 POGLUT1Q8NBL1 392 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 C7orf57Q8NEG2 295 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 OR52B6Q8NGF0 335 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 UHMK1Q8TAS1 419 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 SLC2A12Q8TD20 617 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 ZNF721Q8TF20 911 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 TMEM125Q96AQ2 219 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 PHF21BQ96EK2 531 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 NSUN5Q96P11 429 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 MRPL57Q9BQC6 102 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 CCDC77Q9BR77 488 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 CENPKQ9BS16 269 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 C1QTNF3Q9BXJ4 246 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 TXLNGYQ9BZA5 131 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 MRPL46Q9H2W6 279 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 RPF2Q9H7B2 306 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 NOL11Q9H8H0 719 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 DDX31Q9H8H2 851 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 MYOTQ9UBF9 498 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 PHF11Q9UIL8 331 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 NFU1Q9UMS0 254 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 KLF13Q9Y2Y9 288 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 YARS2Q9Y2Z4 477 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 ATG4BQ9Y4P1 393 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 ASB4Q9Y574 426 aa8.43□□□□□ -1.06
PDLIM5-209ENST00000506632 IKBKGQ9Y6K9 419 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms