RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 SCAMP2O15127 329 aaKnown RBP15.18■□□□□ 0.02
SCLT1-208ENST00000506368 FABP7O15540 132 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 SLC25A14O95258 325 aaPredicted RBP15.18■□□□□ 0.02
SCLT1-208ENST00000506368 RAB36O95755 333 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 B3GALT4O96024 378 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 ANXA3P12429 323 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 GSTM5P46439 218 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 MXD1Q05195 221 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 EIF2B5Q13144 721 aaKnown RBP15.18■□□□□ 0.02
SCLT1-208ENST00000506368 ADAM15Q13444 863 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 TPBGQ13641 420 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 GARNL3Q5VVW2 1013 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 TYW3Q6IPR3 259 aaKnown RBP15.18■□□□□ 0.02
SCLT1-208ENST00000506368 CNIH2Q6PI25 160 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 QSOX2Q6ZRP7 698 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 USP30Q70CQ3 517 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 RNF180Q86T96 592 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 COMMD7Q86VX2 200 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 OR9Q2Q8NGE9 314 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 GOT1L1Q8NHS2 421 aaPredicted RBP15.18■□□□□ 0.02
SCLT1-208ENST00000506368 ACOT12Q8WYK0 555 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 UCN3Q969E3 161 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 FUBP3Q96I24 572 aaKnown RBP eCLIP15.18■□□□□ 0.02
SCLT1-208ENST00000506368 PPIL3Q9H2H8 161 aaKnown RBP15.18■□□□□ 0.02
SCLT1-208ENST00000506368 PCDH10Q9P2E7 1040 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 UBQLN2Q9UHD9 624 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 HCN2Q9UL51 889 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 SNX11Q9Y5W9 270 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 TMEM129A0AVI4 362 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 CACNB4O00305 520 aaPredicted RBP15.18■□□□□ 0.02
SCLT1-208ENST00000506368 RNASET2O00584 256 aaKnown RBP15.18■□□□□ 0.02
SCLT1-208ENST00000506368 CHP2O43745 196 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 PRKYO43930 277 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 GCM2O75603 506 aaPredicted RBP15.18■□□□□ 0.02
SCLT1-208ENST00000506368 ATF4P18848 351 aaPredicted RBP15.18■□□□□ 0.02
SCLT1-208ENST00000506368 EPORP19235 508 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 C4BPBP20851 252 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 STOMP27105 288 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 EVI2BP34910 448 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 ETV1P50549 477 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 ZNF91Q05481 1191 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 SNTA1Q13424 505 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 DSG2Q14126 1118 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 ZNF630Q2M218 657 aaPredicted RBP15.18■□□□□ 0.02
SCLT1-208ENST00000506368 C3orf38Q5JPI3 329 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.18■□□□□ 0.02
SCLT1-208ENST00000506368 GCNT6Q5T4J0 391 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 CPTPQ5TA50 214 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 LIPKQ5VXJ0 399 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 CD276Q5ZPR3 534 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 TAGAPQ8N103 731 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 OXR1Q8N573 874 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 ZNF366Q8N895 744 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 OR52J3Q8NH60 311 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 CHFRQ96EP1 664 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 ZC4H2Q9NQZ6 224 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 RABL2AQ9UBK7 228 aaPredicted RBP15.18■□□□□ 0.02
SCLT1-208ENST00000506368 KCND3Q9UK17 655 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 CLCA3PQ9Y6N3 262 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 TRIP12Q14669 1992 aaPredicted RBP15.18■□□□□ 0.02
SCLT1-208ENST00000506368 PIPSLA2A3N6 862 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 F5H5T6 163 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 PCDH17O14917 1159 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 ITGALP20701 1170 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 APEX1P27695 318 aaKnown RBP15.17■□□□□ 0.02
SCLT1-208ENST00000506368 ACLYP53396 1101 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 WNT4P56705 351 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 EFEMP1Q12805 493 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 IL18Q14116 193 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 C22orf42Q6IC83 251 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 ZNF770Q6IQ21 691 aaPredicted RBP15.17■□□□□ 0.02
SCLT1-208ENST00000506368 CD200R1LQ6Q8B3 271 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 TRILQ7L0X0 811 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 SERPINA9Q86WD7 417 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 CLECL1Q8IZS7 167 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 FBXO22Q8NEZ5 403 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 OR7G3Q8NG95 312 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 OR52N2Q8NGI0 321 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 GTPBP3Q969Y2 492 aaKnown RBP15.17■□□□□ 0.02
SCLT1-208ENST00000506368 MSANTD3Q96H12 275 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 TM9SF2Q99805 663 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 PRR14Q9BWN1 585 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 SLC28A3Q9HAS3 691 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 LYARQ9NX58 379 aaKnown RBP15.17■□□□□ 0.02
SCLT1-208ENST00000506368 KCTD5Q9NXV2 234 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 CLEC2DQ9UHP7 191 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 MGAT4AQ9UM21 535 aa15.17■□□□□ 0.02
SCLT1-208ENST00000506368 SCN10AQ9Y5Y9 1956 aa15.16■□□□□ 0.02
SCLT1-208ENST00000506368 ARL5CA6NH57 179 aa15.16■□□□□ 0.02
SCLT1-208ENST00000506368 CASTOR2A6NHX0 329 aa15.16■□□□□ 0.02
SCLT1-208ENST00000506368 C8GP07360 202 aa15.16■□□□□ 0.02
SCLT1-208ENST00000506368 JUPP14923 745 aa15.16■□□□□ 0.02
SCLT1-208ENST00000506368 TACR2P21452 398 aa15.16■□□□□ 0.02
SCLT1-208ENST00000506368 CST5P28325 142 aaPredicted RBP15.16■□□□□ 0.02
SCLT1-208ENST00000506368 SLC6A1P30531 599 aa15.16■□□□□ 0.02
SCLT1-208ENST00000506368 GABRA5P31644 462 aa15.16■□□□□ 0.02
SCLT1-208ENST00000506368 RPIAP49247 311 aa15.16■□□□□ 0.02
SCLT1-208ENST00000506368 CDH4P55283 916 aa15.16■□□□□ 0.02
SCLT1-208ENST00000506368 WDR5P61964 334 aaKnown RBP15.16■□□□□ 0.02
SCLT1-208ENST00000506368 ALDH6A1Q02252 535 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms