RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 MYO1DO94832 1006 aa16.67■□□□□ 0.26
SMN1-204ENST00000506163 FAM58BPP0C7Q3 252 aa16.67■□□□□ 0.26
SMN1-204ENST00000506163 ALDH3A1P30838 453 aa16.67■□□□□ 0.26
SMN1-204ENST00000506163 PKNOX1P55347 436 aa16.67■□□□□ 0.26
SMN1-204ENST00000506163 BEND6Q5SZJ8 279 aaPredicted RBP16.67■□□□□ 0.26
SMN1-204ENST00000506163 LIPMQ5VYY2 423 aa16.67■□□□□ 0.26
SMN1-204ENST00000506163 SCIMPQ6UWF3 145 aa16.67■□□□□ 0.26
SMN1-204ENST00000506163 APCDD1LQ8NCL9 501 aa16.67■□□□□ 0.26
SMN1-204ENST00000506163 ACPTQ9BZG2 426 aa16.67■□□□□ 0.26
SMN1-204ENST00000506163 SHCBP1LQ9BZQ2 653 aa16.67■□□□□ 0.26
SMN1-204ENST00000506163 BRF2Q9HAW0 419 aa16.67■□□□□ 0.26
SMN1-204ENST00000506163 VTI1BQ9UEU0 232 aa16.67■□□□□ 0.26
SMN1-204ENST00000506163 ZNF223Q9UK11 482 aaPredicted RBP16.67■□□□□ 0.26
SMN1-204ENST00000506163 PPIEQ9UNP9 301 aaKnown RBP16.67■□□□□ 0.26
SMN1-204ENST00000506163 SHANK1Q9Y566 2161 aa16.66■□□□□ 0.26
SMN1-204ENST00000506163 RELNP78509 3460 aa16.66■□□□□ 0.26
SMN1-204ENST00000506163 A0A1W2PS29 197 aa16.66■□□□□ 0.26
SMN1-204ENST00000506163 PGRMC2O15173 223 aa16.66■□□□□ 0.26
SMN1-204ENST00000506163 WDPCPO95876 746 aa16.66■□□□□ 0.26
SMN1-204ENST00000506163 SERPINB3P29508 390 aa16.66■□□□□ 0.26
SMN1-204ENST00000506163 IGLV3-21P80748 117 aaPredicted RBP16.66■□□□□ 0.26
SMN1-204ENST00000506163 TNFRSF17Q02223 184 aa16.66■□□□□ 0.26
SMN1-204ENST00000506163 RCN2Q14257 317 aa16.66■□□□□ 0.26
SMN1-204ENST00000506163 CEP85LQ5SZL2 805 aa16.66■□□□□ 0.26
SMN1-204ENST00000506163 DGAT2L6Q6ZPD8 337 aa16.66■□□□□ 0.26
SMN1-204ENST00000506163 COMMD6Q7Z4G1 85 aa16.66■□□□□ 0.26
SMN1-204ENST00000506163 EXOC3L1Q86VI1 746 aa16.66■□□□□ 0.26
SMN1-204ENST00000506163 NUDT13Q86X67 352 aa16.66■□□□□ 0.26
SMN1-204ENST00000506163 CRLF3Q8IUI8 442 aa16.66■□□□□ 0.26
SMN1-204ENST00000506163 DNAJB14Q8TBM8 379 aa16.66■□□□□ 0.26
SMN1-204ENST00000506163 PTPMT1Q8WUK0 201 aaPredicted RBP16.66■□□□□ 0.26
SMN1-204ENST00000506163 CHTF18Q8WVB6 975 aa16.66■□□□□ 0.26
SMN1-204ENST00000506163 RPF2Q9H7B2 306 aaKnown RBP16.66■□□□□ 0.26
SMN1-204ENST00000506163 KCNK13Q9HB14 408 aa16.66■□□□□ 0.26
SMN1-204ENST00000506163 RRAGDQ9NQL2 400 aaPredicted RBP16.66■□□□□ 0.26
SMN1-204ENST00000506163 TEX10Q9NXF1 929 aaPredicted RBP16.66■□□□□ 0.26
SMN1-204ENST00000506163 STMN3Q9NZ72 180 aa16.66■□□□□ 0.26
SMN1-204ENST00000506163 ARHGAP10A1A4S6 786 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 TTLL8A6PVC2 850 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 J3QKU1 62 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 TRIM13O60858 407 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 ULK1O75385 1050 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 AIFM1O95831 613 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 KRT6AP02538 564 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 KRT6BP04259 564 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 ENO1P06733 434 aaKnown RBP16.65■□□□□ 0.26
SMN1-204ENST00000506163 HMOX2P30519 316 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 ETV4P43268 484 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 KRT6CP48668 564 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 HMGCS1Q01581 520 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 ACER2Q5QJU3 275 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 MMP21Q8N119 569 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 ZNF321PQ8N8H1 164 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 TM9SF4Q92544 642 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 HAS2Q92819 552 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 C19orf60Q96EN9 201 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 SMC6Q96SB8 1091 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 EPS8L2Q9H6S3 715 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 ADAP2Q9NPF8 381 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 LYARQ9NX58 379 aaKnown RBP16.65■□□□□ 0.26
SMN1-204ENST00000506163 MS4A12Q9NXJ0 267 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 PHF11Q9UIL8 331 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 ADAM29Q9UKF5 820 aa16.65■□□□□ 0.26
SMN1-204ENST00000506163 RGS16O15492 202 aaPredicted RBP16.64■□□□□ 0.25
SMN1-204ENST00000506163 PRKNO60260 465 aaPredicted RBP16.64■□□□□ 0.25
SMN1-204ENST00000506163 ARRB2P32121 409 aa16.64■□□□□ 0.25
SMN1-204ENST00000506163 AP2B1P63010 937 aa16.64■□□□□ 0.25
SMN1-204ENST00000506163 RAE1P78406 368 aaKnown RBP16.64■□□□□ 0.25
SMN1-204ENST00000506163 FOLH1Q04609 750 aa16.64■□□□□ 0.25
SMN1-204ENST00000506163 ZNF33BQ06732 778 aa16.64■□□□□ 0.25
SMN1-204ENST00000506163 STX4Q12846 297 aa16.64■□□□□ 0.25
SMN1-204ENST00000506163 MPP2Q14168 576 aa16.64■□□□□ 0.25
SMN1-204ENST00000506163 TERF2Q15554 542 aa16.64■□□□□ 0.25
SMN1-204ENST00000506163 INPP5JQ15735 1006 aaPredicted RBP16.64■□□□□ 0.25
SMN1-204ENST00000506163 CFAP157Q5JU67 520 aa16.64■□□□□ 0.25
SMN1-204ENST00000506163 CES4AQ5XG92 561 aa16.64■□□□□ 0.25
SMN1-204ENST00000506163 CYP20A1Q6UW02 462 aa16.64■□□□□ 0.25
SMN1-204ENST00000506163 BEST3Q8N1M1 668 aa16.64■□□□□ 0.25
SMN1-204ENST00000506163 C1orf52Q8N6N3 182 aaKnown RBP16.64■□□□□ 0.25
SMN1-204ENST00000506163 B3GNT7Q8NFL0 401 aa16.64■□□□□ 0.25
SMN1-204ENST00000506163 DOK4Q8TEW6 326 aa16.64■□□□□ 0.25
SMN1-204ENST00000506163 TANKQ92844 425 aa16.64■□□□□ 0.25
SMN1-204ENST00000506163 APIPQ96GX9 242 aa16.64■□□□□ 0.25
SMN1-204ENST00000506163 CNDP1Q96KN2 507 aa16.64■□□□□ 0.25
SMN1-204ENST00000506163 SLAMF7Q9NQ25 335 aa16.64■□□□□ 0.25
SMN1-204ENST00000506163 VPS29Q9UBQ0 182 aa16.64■□□□□ 0.25
SMN1-204ENST00000506163 STK38LQ9Y2H1 464 aa16.64■□□□□ 0.25
SMN1-204ENST00000506163 PCDHGA10Q9Y5H3 936 aa16.64■□□□□ 0.25
SMN1-204ENST00000506163 SPACA6W5XKT8 324 aa16.64■□□□□ 0.25
SMN1-204ENST00000506163 RP1L1Q8IWN7 2480 aaPredicted RBP16.63■□□□□ 0.25
SMN1-204ENST00000506163 SERTM1A2A2V5 107 aa16.63■□□□□ 0.25
SMN1-204ENST00000506163 BLACEA4D250 179 aa16.63■□□□□ 0.25
SMN1-204ENST00000506163 DDAH2O95865 285 aa16.63■□□□□ 0.25
SMN1-204ENST00000506163 IFNA16P05015 189 aa16.63■□□□□ 0.25
SMN1-204ENST00000506163 HSD3B1P14060 373 aa16.63■□□□□ 0.25
SMN1-204ENST00000506163 HSD3B2P26439 372 aa16.63■□□□□ 0.25
SMN1-204ENST00000506163 TNFSF10P50591 281 aa16.63■□□□□ 0.25
SMN1-204ENST00000506163 FOXK1P85037 733 aa16.63■□□□□ 0.25
SMN1-204ENST00000506163 CSTF3Q12996 717 aaKnown RBP16.63■□□□□ 0.25
SMN1-204ENST00000506163 ELAVL1Q15717 326 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms