RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 CTDSP2O14595 271 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 OR10H3O60404 316 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 MED26O95402 600 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 C6P13671 934 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 SOX3P41225 446 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 ZNF45Q02386 682 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 SELENBP1Q13228 472 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 IRF3Q14653 427 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 DHCR24Q15392 516 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 SEC23BQ15437 767 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 BCL7AQ4VC05 210 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 SPANXN2Q5MJ10 180 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 PNCKQ6P2M8 343 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 TUBA3EQ6PEY2 450 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 UNC5DQ6UXZ4 953 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 GRASPQ7Z6J2 395 aaPredicted RBP7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 REM2Q8IYK8 340 aaPredicted RBP7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 ADGRF3Q8IZF5 1079 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 KRT78Q8N1N4 520 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 FAM46DQ8NEK8 389 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 UBE2E3Q969T4 207 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 NXPE3Q969Y0 559 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 EXOSC8Q96B26 276 aaKnown RBP7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 MTERF3Q96E29 417 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 TMEM19Q96HH6 336 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 LRRC3BQ96PB8 259 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 WFDC6Q9BQY6 131 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 CNPPD1Q9BV87 410 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 CDCA4Q9BXL8 241 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 ZDHHC5Q9C0B5 715 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 NUAK2Q9H093 628 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 CPNE5Q9HCH3 593 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 EXOSC4Q9NPD3 245 aaKnown RBP7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 ZDHHC4Q9NPG8 344 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 DNAJC27Q9NZQ0 273 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 SPATA7Q9P0W8 599 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 TAC3Q9UHF0 121 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 CLEC2DQ9UHP7 191 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 RBMX2Q9Y388 322 aaKnown RBP7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 KLK4Q9Y5K2 254 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 GPC6Q9Y625 555 aaPredicted RBP7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 USP34Q70CQ2 3546 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 A0A0G2JN53 185 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 SH3D21A4FU49 640 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 A8MU76 341 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 PRRT4C9JH25 899 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 H7BY64 318 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 TLR4O00206 839 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 CCRL2O00421 344 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 SNPHO15079 494 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 RGS5O15539 181 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 SEMA7AO75326 666 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 KCNK2O95069 426 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 PRNPP04156 253 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 SERPIND1P05546 499 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 CLTBP09497 229 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 DDCP20711 480 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 DDX6P26196 483 aaKnown RBP eCLIP7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 ACADLP28330 430 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 PRKCDQ05655 676 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 FNDC3BQ53EP0 1204 aaKnown RBP7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 DESI1Q6ICB0 168 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 ZNF770Q6IQ21 691 aaPredicted RBP7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 TCTN3Q6NUS6 607 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 ZNF367Q7RTV3 350 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 C6orf120Q7Z4R8 191 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 HMGN2P46Q86SG4 172 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 SLC34A3Q8N130 599 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 CELF5Q8N6W0 485 aaKnown RBP7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 ANKRD53Q8N9V6 530 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 PLA2G15Q8NCC3 412 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 OR2L2Q8NH16 312 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 HCAR2Q8TDS4 363 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 UCN3Q969E3 161 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 PDXPQ96GD0 296 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 ZFYVE19Q96K21 471 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 PRAP1Q96NZ9 151 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 RSPO3Q9BXY4 272 aaPredicted RBP7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 UCK2Q9BZX2 261 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 NXF2Q9GZY0 626 aaKnown RBP7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 TM7SF3Q9NS93 570 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 CUEDC1Q9NWM3 386 aaPredicted RBP7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 C14orf119Q9NWQ9 140 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 ERVK13-1Q9NX77 482 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 AHSPQ9NZD4 102 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 EHD3Q9NZN3 535 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 CCDC59Q9P031 241 aaKnown RBP7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 ENOPH1Q9UHY7 261 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 UGT2A1Q9Y4X1 527 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 PCDHGB6Q9Y5F9 930 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 SNX11Q9Y5W9 270 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 PEX16Q9Y5Y5 336 aa7.25□□□□□ -1.25
PPARGC1A-204ENST00000506055 LOC110117498-PIK3R3F6TDL0 507 aa7.24□□□□□ -1.25
PPARGC1A-204ENST00000506055 PSMD11O00231 422 aa7.24□□□□□ -1.25
PPARGC1A-204ENST00000506055 HAT1O14929 419 aa7.24□□□□□ -1.25
PPARGC1A-204ENST00000506055 PDPK1O15530 556 aa7.24□□□□□ -1.25
PPARGC1A-204ENST00000506055 MPZL2O60487 215 aa7.24□□□□□ -1.25
PPARGC1A-204ENST00000506055 MFN2O95140 757 aa7.24□□□□□ -1.25
PPARGC1A-204ENST00000506055 PAPLNO95428 1278 aa7.24□□□□□ -1.25
PPARGC1A-204ENST00000506055 TBX6O95947 436 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms