RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 H2AFB2P0C5Z0 115 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 SMIM10L1P0DMW3 83 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 COL6A2P12110 1019 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 COX7A2P14406 83 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 TNNI3P19429 210 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 TLX1P31314 330 aaPredicted RBP9.98□□□□□ -0.81
CDK11A-222ENST00000498810 BUD31P41223 144 aaPredicted RBP9.98□□□□□ -0.81
CDK11A-222ENST00000498810 TNFSF10P50591 281 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 CLCN2P51788 898 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 LIM2P55344 173 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 HSD17B7P56937 341 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 EIF2S3LQ2VIR3 472 aaKnown RBP9.98□□□□□ -0.81
CDK11A-222ENST00000498810 ZNF766Q5HY98 468 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 KHDRBS2Q5VWX1 349 aaKnown RBP9.98□□□□□ -0.81
CDK11A-222ENST00000498810 ABHD17CQ6PCB6 329 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 CYP20A1Q6UW02 462 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 CRLF3Q8IUI8 442 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 ZNF595Q8IYB9 648 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 LAS2Q8IYD9 372 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 PLD6Q8N2A8 252 aaKnown RBP9.98□□□□□ -0.81
CDK11A-222ENST00000498810 OR7G3Q8NG95 312 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 HUS1BQ8NHY5 278 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 ZNF473Q8WTR7 871 aaKnown RBP9.98□□□□□ -0.81
CDK11A-222ENST00000498810 DCAKDQ8WVC6 231 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 PSMF1Q92530 271 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 HAS2Q92819 552 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 TMEM125Q96AQ2 219 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 RGMAQ96B86 450 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 SMIM10Q96HG1 83 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 CSF3RQ99062 836 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 MRPL57Q9BQC6 102 aaKnown RBP9.98□□□□□ -0.81
CDK11A-222ENST00000498810 FUT8Q9BYC5 575 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 RNF32Q9H0A6 362 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 OR51B5Q9H339 312 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 WDR41Q9HAD4 459 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 ADAP2Q9NPF8 381 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 DMRT3Q9NQL9 472 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 NECTIN3Q9NQS3 549 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 KLHL1Q9NR64 748 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 COPG2Q9UBF2 871 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 TBK1Q9UHD2 729 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 PHF11Q9UIL8 331 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 ZNF490Q9ULM2 529 aaPredicted RBP9.98□□□□□ -0.81
CDK11A-222ENST00000498810 DAPP1Q9UN19 280 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 CLCA3PQ9Y6N3 262 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 ZGRF1Q86YA3 2104 aa9.98□□□□□ -0.81
CDK11A-222ENST00000498810 ARHGAP10A1A4S6 786 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 HMX2A2RU54 273 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 BLACEA4D250 179 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 LRRC14BA6NHZ5 514 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 SMIM23A6NLE4 172 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 STX16-NPEPL1H3BU86 382 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 STX16O14662 325 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 UGDHO60701 494 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 CLDN9O95484 217 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 MLYCDO95822 493 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 GHRHP01286 108 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 MTHFD2P13995 350 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 EPORP19235 508 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 HIST1H1TP22492 207 aaPredicted RBP9.97□□□□□ -0.81
CDK11A-222ENST00000498810 ATP5A1P25705 553 aaKnown RBP9.97□□□□□ -0.81
CDK11A-222ENST00000498810 PIK3CBP42338 1070 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 CASP2P42575 452 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 ST13P50502 369 aaKnown RBP9.97□□□□□ -0.81
CDK11A-222ENST00000498810 RPS13P62277 151 aaKnown RBP9.97□□□□□ -0.81
CDK11A-222ENST00000498810 IFT88Q13099 833 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 RUNX2Q13950 521 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 PCBP2Q15366 365 aaKnown RBP eCLIP9.97□□□□□ -0.81
CDK11A-222ENST00000498810 OR1C1Q15619 314 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 ADPRMQ3LIE5 342 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 C6orf163Q5TEZ5 329 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 METTL2BQ6P1Q9 378 aaKnown RBP9.97□□□□□ -0.81
CDK11A-222ENST00000498810 VN1R5Q7Z5H4 357 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 RPS19BP1Q86WX3 136 aaKnown RBP9.97□□□□□ -0.81
CDK11A-222ENST00000498810 CNPY4Q8N129 248 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 TMEM132CQ8N3T6 1108 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 KIF2BQ8N4N8 673 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 TMEM156Q8N614 296 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 ACOT4Q8N9L9 421 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 TMEM178AQ8NBL3 297 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 ST6GALNAC3Q8NDV1 305 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 B3GNT7Q8NFL0 401 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 THAP3Q8WTV1 239 aaPredicted RBP9.97□□□□□ -0.81
CDK11A-222ENST00000498810 FAR1Q8WVX9 515 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 VMP1Q96GC9 406 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 AICDAQ9GZX7 198 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 ELOVL6Q9H5J4 265 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 CDCP1Q9H5V8 836 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 NOL11Q9H8H0 719 aaKnown RBP9.97□□□□□ -0.81
CDK11A-222ENST00000498810 LYRM4Q9HD34 91 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 SEMA4BQ9NPR2 832 aaPredicted RBP9.97□□□□□ -0.81
CDK11A-222ENST00000498810 COPS7AQ9UBW8 275 aa9.97□□□□□ -0.81
CDK11A-222ENST00000498810 E2F3O00716 465 aa9.96□□□□□ -0.82
CDK11A-222ENST00000498810 PRAMEF4O60810 478 aa9.96□□□□□ -0.82
CDK11A-222ENST00000498810 OTCP00480 354 aa9.96□□□□□ -0.82
CDK11A-222ENST00000498810 EDN3P14138 238 aa9.96□□□□□ -0.82
CDK11A-222ENST00000498810 KRT15P19012 456 aa9.96□□□□□ -0.82
CDK11A-222ENST00000498810 PTX3P26022 381 aaPredicted RBP9.96□□□□□ -0.82
CDK11A-222ENST00000498810 PPP2R1BP30154 601 aa9.96□□□□□ -0.82
CDK11A-222ENST00000498810 MAGEA12P43365 314 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms