RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 NFAM1Q8NET5 270 aaPredicted RBP11.97□□□□□ -0.49
HSPG2-213ENST00000498495 B3GNT7Q8NFL0 401 aa11.97□□□□□ -0.49
HSPG2-213ENST00000498495 SUN3Q8TAQ9 357 aa11.97□□□□□ -0.49
HSPG2-213ENST00000498495 DAZLQ92904 295 aaKnown RBP11.97□□□□□ -0.49
HSPG2-213ENST00000498495 MIB2Q96AX9 1013 aa11.97□□□□□ -0.49
HSPG2-213ENST00000498495 SNRNP40Q96DI7 357 aaKnown RBP11.97□□□□□ -0.49
HSPG2-213ENST00000498495 RBM18Q96H35 190 aaKnown RBP11.97□□□□□ -0.49
HSPG2-213ENST00000498495 ZNF717Q9BY31 904 aaPredicted RBP11.97□□□□□ -0.49
HSPG2-213ENST00000498495 DEFB126Q9BYW3 111 aa11.97□□□□□ -0.49
HSPG2-213ENST00000498495 C12orf65Q9H3J6 166 aaKnown RBP11.97□□□□□ -0.49
HSPG2-213ENST00000498495 WDR41Q9HAD4 459 aa11.97□□□□□ -0.49
HSPG2-213ENST00000498495 BRF2Q9HAW0 419 aa11.97□□□□□ -0.49
HSPG2-213ENST00000498495 MID1IP1Q9NPA3 183 aa11.97□□□□□ -0.49
HSPG2-213ENST00000498495 ADAP2Q9NPF8 381 aa11.97□□□□□ -0.49
HSPG2-213ENST00000498495 OXSMQ9NWU1 459 aa11.97□□□□□ -0.49
HSPG2-213ENST00000498495 LGALS13Q9UHV8 139 aa11.97□□□□□ -0.49
HSPG2-213ENST00000498495 VPS4AQ9UN37 437 aa11.97□□□□□ -0.49
HSPG2-213ENST00000498495 PLLPQ9Y342 182 aa11.97□□□□□ -0.49
HSPG2-213ENST00000498495 ATG4BQ9Y4P1 393 aa11.97□□□□□ -0.49
HSPG2-213ENST00000498495 ASB4Q9Y574 426 aa11.97□□□□□ -0.49
HSPG2-213ENST00000498495 COPG1Q9Y678 874 aaKnown RBP11.97□□□□□ -0.49
HSPG2-213ENST00000498495 BSNQ9UPA5 3926 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 TRAV17A0A0B4J275 112 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 OR5H15A6NDH6 313 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 H3BQF6 201 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 MANBAO00462 879 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 TMPRSS11DO60235 418 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 ESRRBO95718 433 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 GBAP04062 536 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 PPP2R1BP30154 601 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 TNFSF10P50591 281 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 HNRNPH2P55795 449 aaKnown RBP11.96□□□□□ -0.49
HSPG2-213ENST00000498495 TNFRSF17Q02223 184 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 ID2Q02363 134 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 ELAVL1Q15717 326 aaKnown RBP11.96□□□□□ -0.49
HSPG2-213ENST00000498495 CCNYL2Q5T2Q4 361 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 MRM1Q6IN84 353 aaKnown RBP11.96□□□□□ -0.49
HSPG2-213ENST00000498495 BEST3Q8N1M1 668 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 METTL4Q8N3J2 472 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 BANPQ8N9N5 519 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 ANKRD9Q96BM1 317 aaPredicted RBP11.96□□□□□ -0.49
HSPG2-213ENST00000498495 C19orf60Q96EN9 201 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 VMP1Q96GC9 406 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 APOPT1Q96IL0 206 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 SMC6Q96SB8 1091 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 TMEM109Q9BVC6 243 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 MRPL1Q9BYD6 325 aaKnown RBP11.96□□□□□ -0.49
HSPG2-213ENST00000498495 SLC29A3Q9BZD2 475 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 RNF32Q9H0A6 362 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 GSTO2Q9H4Y5 243 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 VPS29Q9UBQ0 182 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 ADAM29Q9UKF5 820 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 TIMM22Q9Y584 194 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 PCDHGA10Q9Y5H3 936 aa11.96□□□□□ -0.49
HSPG2-213ENST00000498495 A0A1W2PR48 441 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 C17orf105B2RV13 164 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 FGF17O60258 216 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 TRIM13O60858 407 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 GUCY1B2O75343 617 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 SPAG7O75391 227 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 CRCPO75575 148 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 ENO1P06733 434 aaKnown RBP11.95□□□□□ -0.5
HSPG2-213ENST00000498495 HSD3B1P14060 373 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 COX7A2P14406 83 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 HSD3B2P26439 372 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 OC90Q02509 493 aaPredicted RBP11.95□□□□□ -0.5
HSPG2-213ENST00000498495 ASPHQ12797 758 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 KRT71Q3SY84 523 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 PRR30Q53SZ7 412 aaPredicted RBP11.95□□□□□ -0.5
HSPG2-213ENST00000498495 TCHHL1Q5QJ38 904 aaPredicted RBP11.95□□□□□ -0.5
HSPG2-213ENST00000498495 LIPMQ5VYY2 423 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 RPUSD3Q6P087 351 aaKnown RBP11.95□□□□□ -0.5
HSPG2-213ENST00000498495 C10orf107Q8IVU9 208 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 LGI4Q8N135 537 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 APCDD1LQ8NCL9 501 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 MORN4Q8NDC4 146 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 OR14A16Q8NHC5 309 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 AGAP11Q8TF27 550 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 NCLNQ969V3 563 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 DGAT2Q96PD7 388 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 HBEGFQ99075 208 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 NPAS2Q99743 824 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 UTP23Q9BRU9 249 aaKnown RBP11.95□□□□□ -0.5
HSPG2-213ENST00000498495 AGPAT4Q9NRZ5 378 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 ASF1BQ9NVP2 202 aa11.95□□□□□ -0.5
HSPG2-213ENST00000498495 PPIEQ9UNP9 301 aaKnown RBP11.95□□□□□ -0.5
HSPG2-213ENST00000498495 KALRNO60229 2985 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 TRBV11-1A0A0K0K1C0 115 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 GLOD5A6NK44 160 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 WASHC1A8K0Z3 465 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 GABRR3A8MPY1 467 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 CDK2AP1O14519 115 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 UBFD1O14562 309 aaKnown RBP11.94□□□□□ -0.5
HSPG2-213ENST00000498495 RGS16O15492 202 aaPredicted RBP11.94□□□□□ -0.5
HSPG2-213ENST00000498495 DYRK3O43781 588 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 MAN1A2O60476 641 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 PRKRAO75569 313 aaKnown RBP11.94□□□□□ -0.5
HSPG2-213ENST00000498495 ZFAND5O76080 213 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 GPR75O95800 540 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 NR2F6P10588 404 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms