RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 MAPRE3Q9UPY8 281 aa5.07□□□□□ -1.6
HMGXB4-208ENST00000498325 KCNK6Q9Y257 313 aa5.07□□□□□ -1.6
HMGXB4-208ENST00000498325 TMED5Q9Y3A6 229 aa5.07□□□□□ -1.6
HMGXB4-208ENST00000498325 PCYT1BQ9Y5K3 369 aaPredicted RBP5.07□□□□□ -1.6
HMGXB4-208ENST00000498325 ATG2BQ96BY7 2078 aa5.07□□□□□ -1.6
HMGXB4-208ENST00000498325 NOTCH2Q04721 2471 aa5.07□□□□□ -1.6
HMGXB4-208ENST00000498325 ITPR3Q14573 2671 aa5.07□□□□□ -1.6
HMGXB4-208ENST00000498325 PTPRQQ9UMZ3 2332 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 ZFC3H1O60293 1989 aaKnown RBP5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 KCNE1BA0A087WTH5 132 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 IGHV1OR15-9A0A0B4J2B8 117 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 FAM234BA2RU67 622 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 OR5K4A6NMS3 321 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 C10orf142B7Z368 130 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 E7EQ34 232 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 MRASO14807 208 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 SLC22A3O75751 556 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 RSL1D1O76021 490 aaKnown RBP5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 CCNDBP1O95273 360 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 ATP6V1G2O95670 118 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 NPPAP01160 153 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 IGHV4-34P06331 123 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 ALDOCP09972 364 aaKnown RBP5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 THEGLP0DJG4 465 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 NAT2P11245 290 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 ERGP11308 486 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 PCNAP12004 261 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 CTSEP14091 401 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 ITGAXP20702 1163 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 CD27P26842 260 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 SERPINB1P30740 379 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 CPOXP36551 454 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 ACTR1BP42025 376 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 GIPRP48546 466 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 DHPSP49366 369 aaPredicted RBP5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 NUDT2P50583 147 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 RAB28P51157 221 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 RAP1GDS1P52306 607 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 POLR2JP52435 117 aaKnown RBP5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 ACTR1AP61163 376 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 TBPL1P62380 186 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 RPL38P63173 70 aaKnown RBP5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 CXADRP78310 365 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 ABATP80404 500 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 SLC25A3Q00325 362 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 ILF3Q12906 894 aaKnown RBP eCLIP5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 PRKG2Q13237 762 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 E2F2Q14209 437 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 RPE65Q16518 533 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 CMPK2Q5EBM0 449 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 COQ5Q5HYK3 327 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 TCHHL1Q5QJ38 904 aaPredicted RBP5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 PRAMEF14Q5SWL7 426 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 IL23RQ5VWK5 629 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 PRMT9Q6P2P2 845 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 HACD2Q6Y1H2 254 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 GCNT7Q6ZNI0 430 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 NET1Q7Z628 596 aaPredicted RBP5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 TMPRSS11BQ86T26 416 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 IQCHQ86VS3 1027 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 C17orf64Q86WR6 236 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 ZFAND4Q86XD8 727 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 TRIM48Q8IWZ4 208 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 DEFB107AQ8IZN7 70 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 DSELQ8IZU8 1212 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 PGAM4Q8N0Y7 254 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 TBC1D19Q8N5T2 526 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 TMEM145Q8NBT3 493 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 GLB1L3Q8NCI6 653 aaPredicted RBP5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 RCBTB1Q8NDN9 531 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 OR2L8Q8NGY9 312 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 OR2T11Q8NH01 316 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 HMGCLL1Q8TB92 370 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 ZFPM2Q8WW38 1151 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 OR1E3Q8WZA6 343 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 SNX19Q92543 992 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 NEIL2Q969S2 332 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 TSACCQ96A04 125 aaPredicted RBP5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 ROPN1LQ96C74 230 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 BIRC7Q96CA5 298 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 RCN3Q96D15 328 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 CXorf40BQ96DE9 158 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 SPDL1Q96EA4 605 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 WDR34Q96EX3 536 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 WBP1Q96G27 269 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 OR4K3Q96R72 315 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 HOPXQ9BPY8 73 aaPredicted RBP5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 GSDMCQ9BYG8 508 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 TPSD1Q9BZJ3 242 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 DPY30Q9C005 99 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 PITHD1Q9GZP4 211 aaPredicted RBP5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 KIR3DX1Q9H7L2 352 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 NT5DC2Q9H857 520 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 PELI2Q9HAT8 420 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 BRF2Q9HAW0 419 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 FGF22Q9HCT0 170 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 CD93Q9NPY3 652 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 AASDHPPTQ9NRN7 309 aa5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 IMP3Q9NV31 184 aaKnown RBP5.06□□□□□ -1.6
HMGXB4-208ENST00000498325 AHSPQ9NZD4 102 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms